Pearadise x Orange Juice #2
RSP 12981
Grower: Team Elite Genetics
General Information
- Sample Name
- P X OJ #2 - 20231207
- Accession Date
- December 6, 2023
- Reported Plant Sex
- Female
- Report Type
- Whole-Genome Sequencing
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
PHL-2 | c.455A>C | p.Asp152Ala | missense variant | moderate | contig2621 | 339191 | A/C | |
PHL-2 | c.1057A>G | p.Arg353Gly | missense variant | moderate | contig2621 | 340335 | A/G | |
PHL-2 | c.1096G>A | p.Ala366Thr | missense variant | moderate | contig2621 | 340374 | G/A | |
PHL-2 | c.1540A>G | p.Thr514Ala | missense variant | moderate | contig2621 | 340818 | A/G | |
PHL-2 | c.2756A>C | p.Glu919Ala | missense variant | moderate | contig2621 | 342799 | A/C | |
PHL-2 | c.2783G>A | p.Ser928Asn | missense variant | moderate | contig2621 | 342826 | G/A | |
PHL-2 | c.2830A>G | p.Asn944Asp | missense variant | moderate | contig2621 | 342873 | A/G |
|
PHL-2 |
c.2903_2905d |
p.Ser968dup | disruptive inframe insertion | moderate | contig2621 | 342939 | T/TGCA | |
PHL-2 | c.3002A>G | p.Tyr1001Cys | missense variant | moderate | contig2621 | 343045 | A/G | |
PHL-2 | c.3027G>T | p.Lys1009Asn | missense variant | moderate | contig2621 | 343070 | G/T | |
PHL-2 | c.3033T>G | p.Cys1011Trp | missense variant | moderate | contig2621 | 343076 | T/G | |
PHL-2 | c.3202A>C | p.Thr1068Pro | missense variant | moderate | contig2621 | 343245 | A/C |
|
PHL-2 | c.3209A>G | p.Gln1070Arg | missense variant | moderate | contig2621 | 343252 | A/G | |
PHL-2 | c.3467A>G | p.Gln1156Arg | missense variant | moderate | contig2621 | 343510 | A/G | |
PHL-2 | c.3552delG | p.Lys1185fs | frameshift variant | high | contig2621 | 343593 | CG/C |
|
PKSG-2a | c.948T>G | p.Asp316Glu | missense variant | moderate | contig700 | 1944442 | A/C |
|
PKSG-2a | c.945T>G | p.Ser315Arg | missense variant | moderate | contig700 | 1944445 | A/C |
|
PKSG-2a | c.944G>A | p.Ser315Asn | missense variant | moderate | contig700 | 1944446 | C/T |
|
PKSG-2a | c.934C>G | p.His312Asp | missense variant | moderate | contig700 | 1944456 | G/C |
|
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b | c.544G>T | p.Gly182Trp | missense variant | moderate | contig700 | 2721129 | C/A |
|
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b |
c.353_354ins |
p.Gly119fs | frameshift variant | high | contig700 | 2721319 | T/TGG |
|
PKSG-4b | c.338G>A | p.Gly113Glu | missense variant | moderate | contig700 | 2721335 | C/T |
|
PKSG-4b |
c.235_239dup |
p.Phe80fs | frameshift variant | high | contig700 | 2724195 | G/GAATCT |
|
PKSG-4b | c.134G>A | p.Arg45Gln | missense variant | moderate | contig700 | 2724301 | C/T |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
OAC-1 | c.260C>G | p.Ser87Cys | missense variant | moderate | contig931 | 118104 | G/C |
|
FAD2-2 | c.164A>G | p.His55Arg | missense variant | moderate | contig83 | 1803205 | T/C |
|
FAD2-2 | c.161T>A | p.Leu54His | missense variant | moderate | contig83 | 1803208 | A/T |
|
FAD2-2 | c.64G>T | p.Ala22Ser | missense variant | moderate | contig83 | 1803305 | C/A |
|
ELF3 | c.358G>A | p.Gly120Arg | missense variant | moderate | contig97 | 242064 | G/A | |
ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
ELF3 | c.772A>G | p.Ser258Gly | missense variant | moderate | contig97 | 242478 | A/G |
|
ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
ELF3 |
c.1230-2_123 |
splice acceptor variant & intron variant | high | contig97 | 243676 | TAG/T | ||
ELF3 | c.1466G>A | p.Ser489Asn | missense variant | moderate | contig97 | 244297 | G/A |
|
ELF3 | c.1630A>G | p.Thr544Ala | missense variant | moderate | contig97 | 244461 | A/G | |
ELF3 |
c.1803_1805d |
p.His601del | disruptive inframe deletion | moderate | contig97 | 244625 | ACAT/A |
|
ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
ELF3 | c.2141C>G | p.Pro714Arg | missense variant | moderate | contig97 | 244972 | C/G | |
ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
aPT4 | c.16G>A | p.Val6Ile | missense variant | moderate | contig121 | 2828672 | G/A |
|
aPT4 | c.35A>C | p.Gln12Pro | missense variant | moderate | contig121 | 2828691 | A/C |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 | c.216A>T | p.Lys72Asn | missense variant | moderate | contig121 | 2828872 | A/T |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
AAE1-2 | c.688G>A | p.Asp230Asn | missense variant | moderate | contig81 | 209650 | G/A |
|
AAE1-2 | c.884C>T | p.Thr295Ile | missense variant | moderate | contig81 | 209846 | C/T |
|
AAE1-2 |
c.948_949ins |
p.Asp317fs | frameshift variant | high | contig81 | 209910 | C/CA |
|
AAE1-2 | c.952delC | p.Gln318fs | frameshift variant | high | contig81 | 209912 | AC/A |
|
AAE1-2 | c.953A>G | p.Gln318Arg | missense variant | moderate | contig81 | 209915 | A/G |
|
AAE1-2 | c.955C>T | p.Arg319Cys | missense variant | moderate | contig81 | 209917 | C/T |
|
AAE1-2 | c.1006A>G | p.Lys336Glu | missense variant | moderate | contig81 | 209968 | A/G |
|
AAE1-2 | c.1177G>A | p.Asp393Asn | missense variant | moderate | contig81 | 210139 | G/A |
|
AAE1-2 | c.1415G>A | p.Ser472Asn | missense variant | moderate | contig81 | 210377 | G/A |
|
AAE1-2 | c.1417A>G | p.Thr473Ala | missense variant | moderate | contig81 | 210379 | A/G |
|
AAE1-2 | c.1434G>T | p.Glu478Asp | missense variant | moderate | contig81 | 210396 | G/T |
|
AAE1-2 | c.1541T>C | p.Val514Ala | missense variant | moderate | contig81 | 210503 | T/C |
|
PHL-1 | c.2623A>G | p.Thr875Ala | missense variant | moderate | contig1439 | 1487174 | T/C |
|
PHL-1 | c.2551A>G | p.Thr851Ala | missense variant | moderate | contig1439 | 1487246 | T/C | |
PHL-1 | c.1387A>G | p.Thr463Ala | missense variant | moderate | contig1439 | 1489811 | T/C | |
TFL1 | c.302-1G>A | splice acceptor variant & intron variant | high | contig1636 | 520616 | C/T | ||
HDS-1 | c.1618A>G | p.Ile540Val | missense variant | moderate | contig1891 | 885936 | T/C | |
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 | c.136G>A | p.Val46Ile | missense variant | moderate | contig1891 | 889256 | C/T | |
HDS-1 | c.56C>G | p.Ala19Gly | missense variant | moderate | contig1891 | 889336 | G/C | |
HDS-1 | c.35G>A | p.Cys12Tyr | missense variant | moderate | contig1891 | 889357 | C/T | |
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
|
PIE1-2 | c.6773T>C | p.Leu2258Ser | missense variant | moderate | contig1460 | 1184314 | A/G | |
PIE1-2 | c.6055C>T | p.Leu2019Phe | missense variant | moderate | contig1460 | 1185429 | G/A | |
PIE1-2 |
c.2083_2085d |
p.Val695del | conservative inframe deletion | moderate | contig1460 | 1189954 | GGAC/G | |
PIE1-2 | c.2072A>G | p.His691Arg | missense variant | moderate | contig1460 | 1189968 | T/C | |
PIE1-2 | c.1872T>A | p.Asp624Glu | missense variant | moderate | contig1460 | 1190252 | A/T | |
PIE1-2 | c.1289A>G | p.Asp430Gly | missense variant | moderate | contig1460 | 1192109 | T/C |
|
FT | c.240C>G | p.Asn80Lys | missense variant | moderate | contig1561 | 3124664 | C/G |
|
PIE1-1 | c.100G>A | p.Glu34Lys | missense variant | moderate | contig1225 | 2277786 | G/A | |
PIE1-1 | c.1222C>G | p.Gln408Glu | missense variant | moderate | contig1225 | 2281482 | C/G | |
PIE1-1 | c.6725C>T | p.Ala2242Val | missense variant | moderate | contig1225 | 2289290 | C/T | |
GGR | c.362A>T | p.Tyr121Phe | missense variant | moderate | contig2282 | 549354 | A/T |
|
GGR | c.456T>A | p.His152Gln | missense variant | moderate | contig2282 | 549448 | T/A |
|
GGR | c.460G>A | p.Asp154Asn | missense variant | moderate | contig2282 | 549452 | G/A |
|
GGR | c.679G>A | p.Glu227Lys | missense variant | moderate | contig2282 | 549671 | G/A |
|
GGR | c.704A>T | p.His235Leu | missense variant | moderate | contig2282 | 549696 | A/T |
|
PKSB-3 | c.1652A>G | p.Glu551Gly | missense variant | moderate | contig93 | 3339759 | A/G |
|
PKSB-3 |
c.1850_1852d |
p.Met617dup | disruptive inframe insertion | moderate | contig93 | 3339945 | A/AGAT |
|
PKSB-3 | c.1901C>G | p.Ala634Gly | missense variant | moderate | contig93 | 3340008 | C/G |
|
Nearest genetic relatives (All Samples)
- 0.179 Pearadise x Orange Juice 4 (RSP12975)
- 0.183 Styrofoam Cup x Orange Juice 5 (RSP12974)
- 0.184 Styrofoam Cup x Pearadise 6 (RSP12986)
- 0.184 Styrofoam Cup x Diesel Truck OG 16 (RSP12972)
- 0.199 Styrofoam Cup x Pineapple Pez Melonade 3 (RSP12976)
- 0.200 Center Mark (RSP11629)
- 0.213 Styrofoam Cup x Orange Juice 1 (RSP12980)
- 0.217 Hermaphrodite ResearchSample2 (RSP11050)
- 0.222 Mother s Milk No 31 (RSP11623)
- 0.225 Hermaphrodite ResearchSample2 (RSP11043)
- 0.226 Durban Poison 1 (RSP11013)
- 0.227 SHERBERT (RSP11355)
- 0.227 Styrofoam Cup x Cuban Linx 1 (RSP12984)
- 0.229 Eucalyptus (RSP12803)
- 0.230 Lift (RSP11378)
- 0.230 BLACK JACK (RSP11346)
- 0.231 Durban Poison (RSP11014)
- 0.231 Durban Poison 1 (RSP10996)
- 0.232 Garlic (RSP11341)
- 0.232 Styrofoam Cup x Fuzzy Melon 1 (RSP12977)
Nearest genetic relatives (Base Tree)
- 0.222 Hermaphrodite ResearchSample2 (RSP11050)
- 0.247 Gold Cracker (RSP11048)
- 0.250 Pie Hoe (RSP11073)
- 0.251 Durban Poison (RSP11014)
- 0.258 RKM-2018-009 (RSP11100)
- 0.266 Blueberry Cheesecake (RSP10680)
- 0.267 RKM-2018-020 (RSP11112)
- 0.269 Liberty Haze (RSP11000)
- 0.270 Blueberry Cheesecake (RSP10684)
- 0.276 RKM-2018-027 (RSP11119)
- 0.277 Italian Kiss (RSP11034)
- 0.278 Skywalker OG (RSP10837)
- 0.287 Skunk 18 (RSP11038)
- 0.288 UP Sunrise (RSP10989)
- 0.289 RKM-2018-034 (RSP11126)
- 0.293 RKM-2018-026 (RSP11118)
- 0.295 RKM-2018-003 (RSP11094)
- 0.295 RKM-2018-033 (RSP11125)
- 0.296 Hermaphrodite Research Sample1 (RSP11049)
- 0.300 Kimbo Slice (RSP10997)
Most genetically distant strains (All Samples)
- 0.469 Cherry Blossom (RSP11311)
- 0.460 Cherry Blossom (RSP11318)
- 0.447 Cherry Blossom (RSP11314)
- 0.440 Unknown- Cherry Wine - 001 (RSP11268)
- 0.434 Cherry Blossom (RSP11334)
- 0.432 Cherry Blossom (RSP11333)
- 0.432 Cherry Blossom (RSP11274)
- 0.429 Cherry Blossom (RSP11324)
- 0.427 Cherry Blossom (RSP11301)
- 0.423 Cherry Blossom (RSP11328)
- 0.423 Cherry Blossom (RSP11300)
- 0.423 Cherry Blossom (RSP11323)
- 0.420 Cherry Blossom (RSP11308)
- 0.419 Cherry Blossom (RSP11335)
- 0.416 AVIDEKEL 2 0 (RSP11174)
- 0.415 Tiger Tail 30 (RSP11484)
- 0.414 Chematonic Cannatonic x Chemdawg (RSP11394)
- 0.413 CS Indica (RSP11658)
- 0.413 Cbot-2019-005 (RSP11133)
- 0.412 CS (RSP11208)
Most genetically distant strains (Base Tree)
- 0.414 Cbot-2019-005 (RSP11133)
- 0.389 Cherry (RSP11142)
- 0.386 Cherry (RSP11143)
- 0.381 Kush Hemp E1 (RSP11128)
- 0.377 RKM-2018-019 (RSP11111)
- 0.375 Cbot-2019-001 (RSP11129)
- 0.372 Blueberry Cheesecake (RSP10672)
- 0.367 Carmagnola (RSP11037)
- 0.362 JL yellow (RSP11075)
- 0.362 Santhica27 (RSP11047)
- 0.359 Futura 75 (RSP10664)
- 0.358 Lovrin (RSP10658)
- 0.356 Fedora 17 (RSP10661)
- 0.356 Monoica (RSP10241)
- 0.354 KYRG-11 (RSP11051)
- 0.353 Ivory (RSP10668)
- 0.352 Feral (RSP10890)
- 0.347 Tisza (RSP11044)
- 0.344 Carmagnola (RSP10979)
- 0.341 USO 31 (RSP10981)
Nearest genetic relative in Phylos dataset
Phylos Strain SRR4451123
- Overlapping SNPs:
- 96
- Concordance:
- 62
Nearest genetic relative in Lynch dataset
Lynch Strain SRR3495202
- Overlapping SNPs:
- 1
- Concordance:
- 1
Blockchain Registration Information
- Transaction ID
-
53f75839190deef6
9769cc3a2ccd874f 3589064564f102f1 1bc58afa2ad13c18 - Stamping Certificate
- Download PDF (39.5 KB)
- SHASUM Hash
-
432248ff7a6f462b
c8422f5174191db0 e535f69bfe30f94b 515ab06928312ae2