Kush Hemp E1
RSP 11128
Grower: Sovereign Fields
General Information
- Accession Date
- January 16, 2019
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
- DNA Extracted From
- Stem
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type III
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.948T>G | p.Asp316Glu | missense variant | moderate | contig700 | 1950690 | A/C |
|
PKSG-2b | c.945T>G | p.Ser315Arg | missense variant | moderate | contig700 | 1950693 | A/C |
|
PKSG-2b | c.944G>A | p.Ser315Asn | missense variant | moderate | contig700 | 1950694 | C/T |
|
PKSG-2b | c.934C>G | p.His312Asp | missense variant | moderate | contig700 | 1950704 | G/C |
|
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-2b | c.-2_1dupATA | start lost & conservative inframe insertion | high | contig700 | 1951880 | A/ATAT |
|
|
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
Nearest genetic relatives (All Samples)
- 0.191 RKM-2018-008 (RSP11099)
- 0.216 The Gift (RSP10988)
- 0.255 Wedding Pie (RSP11745)
- 0.256 LEMONCAKE (RSP11340)
- 0.256 Old Family Purple (RSP12098)
- 0.259 GMO x The inhaler (RSP12508)
- 0.261 RKM-2018-012 (RSP11103)
- 0.265 New BSR (RSP12104)
- 0.265 Charlotte Dream (RSP11412)
- 0.267 Cbot-2019-005 (RSP11133)
- 0.267 Square Wave (RSP11344)
- 0.270 RKM-2018-017 (RSP11109)
- 0.272 GMO x Poison Momosa (RSP12500)
- 0.272 RKM-2018-032 (RSP11124)
- 0.272 GMO x Poison Momosa (RSP12626)
- 0.272 RKM-2018-021 (RSP11113)
- 0.274 Pie Hoe (RSP11073)
- 0.275 RKM-2018-013 (RSP11104)
- 0.276 Goin Bananas (RSP12509)
- 0.278 SFVxTK (RSP11072)
Most genetically distant strains (All Samples)
- 0.531 Cherry Blossom (RSP11328)
- 0.520 Cherry Blossom (RSP11318)
- 0.481 Cherry Blossom (RSP11309)
- 0.474 Cherry Blossom (RSP11323)
- 0.472 Unknown--Cherry Wine---001- (RSP11268)
- 0.471 Cherry Blossom (RSP11330)
- 0.464 Cherry Blossom (RSP11327)
- 0.464 Cherry Blossom (RSP11312)
- 0.459 Unknown--Cherry Wine---003- (RSP11270)
- 0.455 Cherry Blossom (RSP11298)
- 0.453 Cherry Blossom (RSP11310)
- 0.452 Tanao Sri -46- (RSP11486)
- 0.451 Cherry Blossom (RSP11332)
- 0.446 Chematonic -Cannatonic x Chemdawg- (RSP11394)
- 0.444 Unknown--Cherry Wine---002- (RSP11269)
- 0.443 Cherry Blossom (RSP11317)
- 0.442 Cherry Blossom (RSP11311)
- 0.440 JL x NSPM1 2 (RSP11480)
- 0.438 Cherry Blossom (RSP11301)
- 0.437 Alaska 05MAY2017 (RSP10939)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 113
- Concordance:
- 75
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 3
- Concordance:
- 3
Blockchain Registration Information
- Transaction ID
-
2c5574a5fe0f2437
95f255923473a88e bd25a3eb327c8838 3ed4068fa740754d - Stamping Certificate
- Download PDF (854.9 KB)
- SHASUM Hash
-
c0e4593292350db2
9b252521ed6ab542 47c0bc6daf6f92b8 cf467c058a77ddc4