Pearadise x Orange Juice #4
RSP 12975
Grower: Team Elite Genetics
General Information
- Sample Name
- P X OJ #4 - 20231207
- Accession Date
- December 6, 2023
- Reported Plant Sex
- Female
- Report Type
- Whole-Genome Sequencing
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
PHL-2 | c.455A>C | p.Asp152Ala | missense variant | moderate | contig2621 | 339191 | A/C | |
PHL-2 | c.1057A>G | p.Arg353Gly | missense variant | moderate | contig2621 | 340335 | A/G | |
PHL-2 | c.1096G>A | p.Ala366Thr | missense variant | moderate | contig2621 | 340374 | G/A | |
PHL-2 | c.1540A>G | p.Thr514Ala | missense variant | moderate | contig2621 | 340818 | A/G | |
PHL-2 | c.2564T>A | p.Phe855Tyr | missense variant | moderate | contig2621 | 342607 | T/A | |
PHL-2 | c.2578T>A | p.Leu860Ile | missense variant | moderate | contig2621 | 342621 | T/A | |
PHL-2 | c.2756A>C | p.Glu919Ala | missense variant | moderate | contig2621 | 342799 | A/C | |
PHL-2 | c.2783G>A | p.Ser928Asn | missense variant | moderate | contig2621 | 342826 | G/A | |
PHL-2 | c.2830A>G | p.Asn944Asp | missense variant | moderate | contig2621 | 342873 | A/G |
|
PHL-2 |
c.2903_2905d |
p.Ser968dup | disruptive inframe insertion | moderate | contig2621 | 342939 | T/TGCA | |
PHL-2 | c.3002A>G | p.Tyr1001Cys | missense variant | moderate | contig2621 | 343045 | A/G | |
PHL-2 | c.3027G>T | p.Lys1009Asn | missense variant | moderate | contig2621 | 343070 | G/T | |
PHL-2 | c.3033T>G | p.Cys1011Trp | missense variant | moderate | contig2621 | 343076 | T/G | |
PHL-2 | c.3202A>C | p.Thr1068Pro | missense variant | moderate | contig2621 | 343245 | A/C |
|
PHL-2 | c.3209A>G | p.Gln1070Arg | missense variant | moderate | contig2621 | 343252 | A/G | |
PHL-2 | c.3467A>G | p.Gln1156Arg | missense variant | moderate | contig2621 | 343510 | A/G | |
PHL-2 | c.3552delG | p.Lys1185fs | frameshift variant | high | contig2621 | 343593 | CG/C |
|
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.186A>T | p.Arg62Ser | missense variant | moderate | contig380 | 288577 | T/A |
|
FAD2-2 | c.64G>T | p.Ala22Ser | missense variant | moderate | contig83 | 1803305 | C/A |
|
ELF3 | c.358G>A | p.Gly120Arg | missense variant | moderate | contig97 | 242064 | G/A | |
ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
ELF3 | c.574A>G | p.Asn192Asp | missense variant | moderate | contig97 | 242280 | A/G | |
ELF3 | c.772A>G | p.Ser258Gly | missense variant | moderate | contig97 | 242478 | A/G |
|
ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
ELF3 |
c.1230-2_123 |
splice acceptor variant & intron variant | high | contig97 | 243676 | TAG/T | ||
ELF3 | c.1466G>A | p.Ser489Asn | missense variant | moderate | contig97 | 244297 | G/A |
|
ELF3 | c.1630A>G | p.Thr544Ala | missense variant | moderate | contig97 | 244461 | A/G | |
ELF3 |
c.1803_1805d |
p.His601del | disruptive inframe deletion | moderate | contig97 | 244625 | ACAT/A |
|
ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
ELF3 | c.2141C>G | p.Pro714Arg | missense variant | moderate | contig97 | 244972 | C/G | |
ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
AAE1-2 | c.688G>A | p.Asp230Asn | missense variant | moderate | contig81 | 209650 | G/A |
|
AAE1-2 | c.884C>T | p.Thr295Ile | missense variant | moderate | contig81 | 209846 | C/T |
|
AAE1-2 |
c.948_949ins |
p.Asp317fs | frameshift variant | high | contig81 | 209910 | C/CA |
|
AAE1-2 | c.952delC | p.Gln318fs | frameshift variant | high | contig81 | 209912 | AC/A |
|
AAE1-2 | c.953A>G | p.Gln318Arg | missense variant | moderate | contig81 | 209915 | A/G |
|
AAE1-2 | c.955C>T | p.Arg319Cys | missense variant | moderate | contig81 | 209917 | C/T |
|
AAE1-2 | c.1006A>G | p.Lys336Glu | missense variant | moderate | contig81 | 209968 | A/G |
|
AAE1-2 | c.1177G>A | p.Asp393Asn | missense variant | moderate | contig81 | 210139 | G/A |
|
AAE1-2 | c.1415G>A | p.Ser472Asn | missense variant | moderate | contig81 | 210377 | G/A |
|
AAE1-2 | c.1417A>G | p.Thr473Ala | missense variant | moderate | contig81 | 210379 | A/G |
|
AAE1-2 | c.1434G>T | p.Glu478Asp | missense variant | moderate | contig81 | 210396 | G/T |
|
AAE1-2 | c.1541T>C | p.Val514Ala | missense variant | moderate | contig81 | 210503 | T/C |
|
PHL-1 | c.2623A>G | p.Thr875Ala | missense variant | moderate | contig1439 | 1487174 | T/C |
|
Edestin | c.299C>T | p.Pro100Leu | missense variant | moderate | contig850 | 3064991 | G/A |
|
Edestin | c.231G>T | p.Glu77Asp | missense variant | moderate | contig850 | 3065059 | C/A |
|
Edestin | c.16T>C | p.Ser6Pro | missense variant | moderate | contig850 | 3065274 | A/G |
|
TFL1 | c.304G>A | p.Asp102Asn | missense variant & splice region variant | moderate | contig1636 | 520613 | C/T |
|
TFL1 | c.302-1G>A | splice acceptor variant & intron variant | high | contig1636 | 520616 | C/T | ||
HDS-1 | c.1618A>G | p.Ile540Val | missense variant | moderate | contig1891 | 885936 | T/C | |
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 | c.136G>A | p.Val46Ile | missense variant | moderate | contig1891 | 889256 | C/T | |
HDS-1 | c.56C>G | p.Ala19Gly | missense variant | moderate | contig1891 | 889336 | G/C | |
HDS-1 | c.35G>A | p.Cys12Tyr | missense variant | moderate | contig1891 | 889357 | C/T | |
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
|
PIE1-2 | c.6773T>C | p.Leu2258Ser | missense variant | moderate | contig1460 | 1184314 | A/G | |
PIE1-2 | c.5932A>G | p.Ile1978Val | missense variant | moderate | contig1460 | 1185552 | T/C | |
PIE1-2 | c.1318A>G | p.Asn440Asp | missense variant | moderate | contig1460 | 1192080 | T/C | |
PIE1-2 | c.1294G>A | p.Asp432Asn | missense variant | moderate | contig1460 | 1192104 | C/T | |
PIE1-2 | c.1289A>G | p.Asp430Gly | missense variant | moderate | contig1460 | 1192109 | T/C |
|
PIE1-2 | c.1279G>A | p.Val427Ile | missense variant | moderate | contig1460 | 1192119 | C/T | |
PIE1-2 | c.710C>T | p.Pro237Leu | missense variant | moderate | contig1460 | 1193804 | G/A | |
PIE1-2 | c.706T>C | p.Tyr236His | missense variant | moderate | contig1460 | 1193808 | A/G | |
EMF2 | c.1772A>G | p.Gln591Arg | missense variant | moderate | contig954 | 3059929 | A/G | |
FT | c.240C>G | p.Asn80Lys | missense variant | moderate | contig1561 | 3124664 | C/G |
|
FLD | c.2981T>C | p.Met994Thr | missense variant | moderate | contig1450 | 2044012 | A/G | |
FLD | c.2964C>A | p.Asp988Glu | missense variant | moderate | contig1450 | 2044029 | G/T | |
FLD | c.2929T>C | p.Phe977Leu | missense variant | moderate | contig1450 | 2044103 | A/G | |
AAE1-3 | c.722G>A | p.Arg241Lys | missense variant | moderate | contig976 | 1083132 | C/T |
|
AAE1-3 | c.659G>A | p.Arg220Gln | missense variant | moderate | contig976 | 1083195 | C/T |
|
AAE1-3 | c.634G>C | p.Gly212Arg | missense variant | moderate | contig976 | 1083220 | C/G |
|
AAE1-3 | c.199A>G | p.Asn67Asp | missense variant | moderate | contig976 | 1083876 | T/C |
|
AAE1-3 | c.188A>G | p.Asn63Ser | missense variant | moderate | contig976 | 1083887 | T/C |
|
PIE1-1 | c.100G>A | p.Glu34Lys | missense variant | moderate | contig1225 | 2277786 | G/A | |
PIE1-1 | c.1066C>T | p.Arg356Trp | missense variant | moderate | contig1225 | 2281326 | C/T | |
PIE1-1 | c.1222C>G | p.Gln408Glu | missense variant | moderate | contig1225 | 2281482 | C/G | |
PIE1-1 | c.1249G>T | p.Val417Leu | missense variant | moderate | contig1225 | 2281509 | G/T | |
GGR | c.704A>T | p.His235Leu | missense variant | moderate | contig2282 | 549696 | A/T |
|
PKSB-3 | c.1652A>G | p.Glu551Gly | missense variant | moderate | contig93 | 3339759 | A/G |
|
PKSB-3 | c.1901C>G | p.Ala634Gly | missense variant | moderate | contig93 | 3340008 | C/G |
|
Nearest genetic relatives (All Samples)
- 0.141 Styrofoam Cup x Orange Juice 5 (RSP12974)
- 0.177 Mother s Milk No 31 (RSP11623)
- 0.179 Pearadise x Orange Juice 2 (RSP12981)
- 0.182 Mothers Milk 5 (RSP11186)
- 0.182 Headcheese (RSP11192)
- 0.192 Garlic (RSP11341)
- 0.197 Styrofoam Cup x Orange Juice 1 (RSP12980)
- 0.198 Styrofoam Cup x Pearadise 6 (RSP12986)
- 0.201 Styrofoam Cup x Pineapple Pez Melonade 3 (RSP12976)
- 0.203 NSPM x NSPM (RSP11487)
- 0.211 GMO (RSP12091)
- 0.215 Serious Happiness (RSP10763)
- 0.216 Domnesia (RSP11184)
- 0.218 Styrofoam Cup x Cuban Linx 6 (RSP12982)
- 0.219 A15 (RSP12655)
- 0.221 El Gordo (RSP12938)
- 0.223 Blueberry Cheesecake (RSP10684)
- 0.223 Pieface (RSP12794)
- 0.224 Glitter Bomb (RSP12901)
- 0.224 El Presidente (RSP12807)
Nearest genetic relatives (Base Tree)
- 0.227 Blueberry Cheesecake (RSP10684)
- 0.234 RKM-2018-009 (RSP11100)
- 0.244 Liberty Haze (RSP11000)
- 0.245 Sour Raspberry (RSP10551)
- 0.246 Gold Cracker (RSP11048)
- 0.249 Hermaphrodite ResearchSample2 (RSP11050)
- 0.251 RKM-2018-032 (RSP11124)
- 0.255 RKM-2018-004 (RSP11096)
- 0.258 RKM-2018-033 (RSP11125)
- 0.259 Blueberry Cheesecake (RSP10680)
- 0.262 Skywalker OG (RSP10837)
- 0.264 Hermaphrodite Research Sample1 (RSP11049)
- 0.265 RKM-2018-031 (RSP11123)
- 0.273 Durban Poison (RSP11014)
- 0.277 CST (RSP11002)
- 0.280 RKM-2018-002 (RSP11093)
- 0.283 Italian Kiss (RSP11034)
- 0.285 UP Sunrise (RSP10989)
- 0.286 Blue Dream (RSP11033)
- 0.287 Pie Hoe (RSP11073)
Most genetically distant strains (All Samples)
- 0.467 Cherry Blossom (RSP11311)
- 0.440 Jamaican Lion (RSP12913)
- 0.433 Unknown- Cherry Wine - 001 (RSP11268)
- 0.432 Cherry Blossom (RSP11318)
- 0.428 Cherry Blossom (RSP11323)
- 0.428 Cherry Blossom (RSP11328)
- 0.424 Jamaican Lion (RSP12916)
- 0.422 Cherry Blossom (RSP11312)
- 0.422 Cherry Blossom (RSP11314)
- 0.421 Cbot-2019-005 (RSP11133)
- 0.420 Cherry Blossom (RSP11300)
- 0.420 Tanao Sri 46 (RSP11486)
- 0.419 Tanao Sri-white 80 (RSP11621)
- 0.418 Cherry Blossom (RSP11309)
- 0.418 Unknown- Cherry Wine - 003 (RSP11270)
- 0.417 AVIDEKEL 2 0 (RSP11174)
- 0.417 Tiger Tail 30 (RSP11484)
- 0.416 Unknown- Cherry Wine - 002 (RSP11269)
- 0.413 Cherry Blossom (RSP11335)
- 0.411 JL 3rd Gen Father (RSP11196)
Most genetically distant strains (Base Tree)
- 0.429 Cbot-2019-005 (RSP11133)
- 0.405 JL yellow (RSP11075)
- 0.382 Cherry (RSP11142)
- 0.374 Futura 75 (RSP10664)
- 0.372 Monoica (RSP10241)
- 0.367 USO 31 (RSP10981)
- 0.366 Feral (RSP10890)
- 0.366 Carmagnola (RSP11037)
- 0.364 Cherry (RSP11143)
- 0.362 Santhica27 (RSP11047)
- 0.360 Lovrin (RSP10658)
- 0.360 Ivory (RSP10668)
- 0.359 Cbot-2019-001 (RSP11129)
- 0.358 Fedora 17 (RSP10661)
- 0.356 Jiangji (RSP10653)
- 0.355 Kush Hemp E1 (RSP11128)
- 0.354 Tisza (RSP11044)
- 0.350 Carmagnola (RSP10979)
- 0.346 KYRG-11 (RSP11051)
- 0.345 RKM-2018-019 (RSP11111)
Nearest genetic relative in Phylos dataset
Phylos Strain SRR8346697
- Overlapping SNPs:
- 94
- Concordance:
- 61
Nearest genetic relative in Lynch dataset
Lynch Strain SRR3495202
- Overlapping SNPs:
- 1
- Concordance:
- 1
Blockchain Registration Information
- Transaction ID
-
5b0fb84c422354d4
02b31b8e419400ff 2e4c6c901cc17c89 a3edcb022f1340c1 - Stamping Certificate
- Download PDF (39.3 KB)
- SHASUM Hash
-
99ec5526c3a82b13
a17890ccc17bffd0 f128f5501335295f c12cedd317fc0623