GA-G13-001
RSP 13513
Grower: James L. Long
General Information
- Accession Date
- February 25, 2026
- Reported Plant Sex
- Female
- Report Type
- Whole-Genome Sequencing
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.
This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).
This chart represents the Illumina sequence coverage over the CBCA synthase gene.
Variants (THCAS, CBDAS, and CBCAS)
| CBCAS | c.1420C>T | p.Pro474Ser | missense variant | moderate | contig756 | 3100726 | C/T |
|
| THCAS | c.1625C>T | p.Pro542Leu | missense variant | moderate | contig741 | 4416203 | G/A |
|
| THCAS | c.749C>A | p.Ala250Asp | missense variant | moderate | contig741 | 4417079 | G/T | |
| THCAS | c.187A>C | p.Ile63Leu | missense variant | moderate | contig741 | 4417641 | T/G |
Variants (Select Genes of Interest)
| PKSA-3b | c.298G>A | p.Ala100Thr | missense variant | moderate | contig705 | 2271640 | C/T | |
| EMF1-2 | c.710A>C | p.His237Pro | missense variant | moderate | contig885 | 810 | A/C | |
| PHL-2 | c.932T>C | p.Leu311Pro | missense variant | moderate | contig2621 | 340210 | T/C | |
| PHL-2 | c.1057A>G | p.Arg353Gly | missense variant | moderate | contig2621 | 340335 | A/G | |
| PHL-2 | c.1096G>A | p.Ala366Thr | missense variant | moderate | contig2621 | 340374 | G/A | |
| PHL-2 | c.2564T>A | p.Phe855Tyr | missense variant | moderate | contig2621 | 342607 | T/A | |
| PHL-2 | c.2578T>A | p.Leu860Ile | missense variant | moderate | contig2621 | 342621 | T/A | |
| PHL-2 | c.2783G>A | p.Ser928Asn | missense variant | moderate | contig2621 | 342826 | G/A | |
| PHL-2 | c.2830A>C | p.Asn944His | missense variant | moderate | contig2621 | 342873 | A/C |
|
| PHL-2 | c.2933G>T | p.Arg978Leu | missense variant | moderate | contig2621 | 342976 | G/T | |
| PHL-2 | c.2936T>G | p.Val979Gly | missense variant | moderate | contig2621 | 342979 | T/G |
|
| PHL-2 | c.3209A>G | p.Gln1070Arg | missense variant | moderate | contig2621 | 343252 | A/G | |
| PHL-2 | c.3467A>G | p.Gln1156Arg | missense variant | moderate | contig2621 | 343510 | A/G | |
| PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
| PKSG-2b | c.718T>A | p.Phe240Ile | missense variant | moderate | contig700 | 1950920 | A/T |
|
| PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
| PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
| PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
| PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
| PKSG-4b | c.316+2T>A | splice donor variant & intron variant | high | contig700 | 2723818 | A/T | ||
| PKSG-4b | c.229G>A | p.Gly77Ser | missense variant | moderate | contig700 | 2724206 | C/T |
|
| PKSG-4b | c.216G>C | p.Leu72Phe | missense variant | moderate | contig700 | 2724219 | C/G |
|
| PKSG-4b | c.206T>C | p.Leu69Ser | missense variant | moderate | contig700 | 2724229 | A/G |
|
| AAE1-1 |
c.689_690del |
p.Ser230fs | frameshift variant | high | contig606 | 3243580 | GGC/G |
|
| AAE1-1 | c.634A>G | p.Ile212Val | missense variant | moderate | contig606 | 3243637 | T/C |
|
| DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
| OAC-2 | c.260C>G | p.Ser87Cys | missense variant | moderate | contig931 | 109979 | G/C |
|
| OAC-1 | c.260C>G | p.Ser87Cys | missense variant | moderate | contig931 | 118104 | G/C |
|
| FAD2-2 | c.185C>T | p.Ala62Val | missense variant | moderate | contig83 | 1803184 | G/A |
|
| FAD2-2 | c.161T>A | p.Leu54His | missense variant | moderate | contig83 | 1803208 | A/T |
|
| FAD2-2 | c.110C>T | p.Ala37Val | missense variant | moderate | contig83 | 1803259 | G/A |
|
| ELF3 | c.358G>A | p.Gly120Arg | missense variant | moderate | contig97 | 242064 | G/A | |
| ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
| ELF3 | c.772A>G | p.Ser258Gly | missense variant | moderate | contig97 | 242478 | A/G |
|
| ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
| ELF3 |
c.1230-2_123 |
splice acceptor variant & intron variant | high | contig97 | 243676 | TAG/T | ||
| ELF3 | c.1466G>A | p.Ser489Asn | missense variant | moderate | contig97 | 244297 | G/A |
|
| ELF3 | c.1630A>G | p.Thr544Ala | missense variant | moderate | contig97 | 244461 | A/G | |
| ELF3 |
c.1803_1805d |
p.His601del | disruptive inframe deletion | moderate | contig97 | 244625 | ACAT/A |
|
| ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
| ELF3 | c.2141C>G | p.Pro714Arg | missense variant | moderate | contig97 | 244972 | C/G | |
| ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
| aPT4 | c.35A>C | p.Gln12Pro | missense variant | moderate | contig121 | 2828691 | A/C |
|
| aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
| aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
| aPT4 | c.216A>T | p.Lys72Asn | missense variant | moderate | contig121 | 2828872 | A/T |
|
| aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
| aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
| HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
| HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
| AAE1-2 | c.331A>G | p.Asn111Asp | missense variant | moderate | contig81 | 209293 | A/G |
|
| AAE1-2 | c.1118C>G | p.Thr373Ser | missense variant | moderate | contig81 | 210080 | C/G |
|
| AAE1-2 | c.1541T>C | p.Val514Ala | missense variant | moderate | contig81 | 210503 | T/C |
|
| PHL-1 | c.2623A>G | p.Thr875Ala | missense variant | moderate | contig1439 | 1487174 | T/C |
|
| PHL-1 | c.2551A>G | p.Thr851Ala | missense variant | moderate | contig1439 | 1487246 | T/C | |
| PHL-1 | c.1387A>G | p.Thr463Ala | missense variant | moderate | contig1439 | 1489811 | T/C | |
| PHL-1 | c.407G>A | p.Arg136Gln | missense variant | moderate | contig1439 | 1491441 | C/T | |
| PHL-1 | c.176G>A | p.Gly59Glu | missense variant | moderate | contig1439 | 1492817 | C/T |
|
| PHL-1 | c.175G>A | p.Gly59Arg | missense variant | moderate | contig1439 | 1492818 | C/T | |
| Edestin | c.40G>A | p.Ala14Thr | missense variant | moderate | contig850 | 3065250 | C/T |
|
| Edestin | c.17C>T | p.Ser6Leu | missense variant | moderate | contig850 | 3065273 | G/A |
|
| Edestin | c.16T>C | p.Ser6Pro | missense variant | moderate | contig850 | 3065274 | A/G |
|
| TFL1 | c.304G>A | p.Asp102Asn | missense variant & splice region variant | moderate | contig1636 | 520613 | C/T |
|
| TFL1 | c.302-1G>A | splice acceptor variant & intron variant | high | contig1636 | 520616 | C/T | ||
| FAD4 | c.121G>T | p.Val41Phe | missense variant | moderate | contig784 | 1690873 | G/T |
|
| FAD4 | c.220C>G | p.Arg74Gly | missense variant | moderate | contig784 | 1690972 | C/G |
|
| HDS-1 | c.1618A>G | p.Ile540Val | missense variant | moderate | contig1891 | 885936 | T/C | |
| HDS-1 | c.1381G>A | p.Asp461Asn | missense variant | moderate | contig1891 | 886367 | C/T |
|
| HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
| HDS-1 | c.136G>A | p.Val46Ile | missense variant | moderate | contig1891 | 889256 | C/T | |
| HDS-1 | c.56C>G | p.Ala19Gly | missense variant | moderate | contig1891 | 889336 | G/C | |
| HDS-1 | c.35G>A | p.Cys12Tyr | missense variant | moderate | contig1891 | 889357 | C/T | |
| PIE1-2 | c.5932A>G | p.Ile1978Val | missense variant | moderate | contig1460 | 1185552 | T/C | |
| PIE1-2 | c.1872T>A | p.Asp624Glu | missense variant | moderate | contig1460 | 1190252 | A/T | |
| PIE1-2 | c.1696G>A | p.Val566Met | missense variant | moderate | contig1460 | 1191534 | C/T |
|
| PIE1-2 | c.1683A>T | p.Leu561Phe | missense variant | moderate | contig1460 | 1191547 | T/A |
|
| PIE1-2 | c.1630G>C | p.Ala544Pro | missense variant | moderate | contig1460 | 1191600 | C/G | |
| PIE1-2 | c.1318A>G | p.Asn440Asp | missense variant | moderate | contig1460 | 1192080 | T/C | |
| PIE1-2 | c.1294G>A | p.Asp432Asn | missense variant | moderate | contig1460 | 1192104 | C/T | |
| PIE1-2 | c.1289A>G | p.Asp430Gly | missense variant | moderate | contig1460 | 1192109 | T/C |
|
| PIE1-2 | c.1279G>A | p.Val427Ile | missense variant | moderate | contig1460 | 1192119 | C/T | |
| PIE1-2 | c.1015G>A | p.Asp339Asn | missense variant | moderate | contig1460 | 1192383 | C/T | |
| PIE1-2 | c.982G>A | p.Glu328Lys | missense variant | moderate | contig1460 | 1192416 | C/T | |
| PIE1-2 | c.961C>T | p.Arg321Trp | missense variant | moderate | contig1460 | 1192437 | G/A | |
| PIE1-2 | c.710C>T | p.Pro237Leu | missense variant | moderate | contig1460 | 1193804 | G/A | |
| PIE1-2 | c.637T>A | p.Ser213Thr | missense variant | moderate | contig1460 | 1194421 | A/T | |
| EMF2 | c.1772A>G | p.Gln591Arg | missense variant | moderate | contig954 | 3059929 | A/G | |
| FLD | c.2746A>G | p.Asn916Asp | missense variant | moderate | contig1450 | 2044531 | T/C |
|
| FLD | c.2686G>A | p.Ala896Thr | missense variant | moderate | contig1450 | 2044848 | C/T | |
| FLD | c.2681T>C | p.Ile894Thr | missense variant | moderate | contig1450 | 2044853 | A/G | |
| FLD | c.125G>A | p.Ser42Asn | missense variant | moderate | contig1450 | 2047909 | C/T | |
| AAE1-3 | c.634G>C | p.Gly212Arg | missense variant | moderate | contig976 | 1083220 | C/G |
|
| AAE1-3 | c.382T>C | p.Tyr128His | missense variant | moderate | contig976 | 1083643 | A/G |
|
| AAE1-3 | c.293A>G | p.Asp98Gly | missense variant | moderate | contig976 | 1083732 | T/C |
|
| AAE1-3 | c.284A>T | p.Glu95Val | missense variant | moderate | contig976 | 1083741 | T/A |
|
| AAE1-3 | c.214G>T | p.Glu72* | stop gained | high | contig976 | 1083861 | C/A |
|
| AAE1-3 | c.181G>A | p.Val61Ile | missense variant | moderate | contig976 | 1083894 | C/T |
|
| AAE1-3 | c.179C>T | p.Thr60Ile | missense variant | moderate | contig976 | 1083896 | G/A |
|
| AAE1-3 | c.167A>G | p.Glu56Gly | missense variant | moderate | contig976 | 1083908 | T/C |
|
| AAE1-3 | c.125A>G | p.Glu42Gly | missense variant | moderate | contig976 | 1083950 | T/C |
|
| AAE1-3 | c.104T>C | p.Leu35Pro | missense variant | moderate | contig976 | 1083971 | A/G |
|
| AAE1-3 | c.79A>G | p.Thr27Ala | missense variant | moderate | contig976 | 1083996 | T/C |
|
| AAE1-3 | c.52G>A | p.Gly18Ser | missense variant | moderate | contig976 | 1084023 | C/T |
|
| PIE1-1 | c.1066C>T | p.Arg356Trp | missense variant | moderate | contig1225 | 2281326 | C/T | |
| PIE1-1 | c.1120G>A | p.Asp374Asn | missense variant | moderate | contig1225 | 2281380 | G/A |
|
| PIE1-1 | c.1222C>G | p.Gln408Glu | missense variant | moderate | contig1225 | 2281482 | C/G | |
| PIE1-1 | c.1249G>T | p.Val417Leu | missense variant | moderate | contig1225 | 2281509 | G/T | |
| PIE1-1 | c.1785A>T | p.Leu595Phe | missense variant | moderate | contig1225 | 2282213 | A/T | |
| PIE1-1 | c.3619G>A | p.Val1207Met | missense variant | moderate | contig1225 | 2285234 | G/A |
|
| PIE1-1 | c.6725C>T | p.Ala2242Val | missense variant | moderate | contig1225 | 2289290 | C/T | |
| GGR | c.704A>T | p.His235Leu | missense variant | moderate | contig2282 | 549696 | A/T |
|
| PKSB-3 | c.1652A>G | p.Glu551Gly | missense variant | moderate | contig93 | 3339759 | A/G |
|
| PKSB-3 |
c.1850_1852d |
p.Met617dup | disruptive inframe insertion | moderate | contig93 | 3339945 | A/AGAT |
|
| PKSB-3 | c.1901C>G | p.Ala634Gly | missense variant | moderate | contig93 | 3340008 | C/G |
|
Nearest genetic relatives (All Samples)
- 0.095 Black 84 (RSP11188)
- 0.234 Banana Kush (RSP11739)
- 0.236 Rest (RSP11377)
- 0.247 Miss X (RSP10999)
- 0.254 Trump x Trump (RSP11466)
- 0.256 Lemon G13 (RSP11465)
- 0.264 JL Cross 3 (RSP11504)
- 0.265 Domnesia (RSP11184)
- 0.265 Badger (RSP11614)
- 0.266 Thank You Jerry (RSP11459)
- 0.266 GPie x GodMac cross (RSP13223)
- 0.268 Tenth Planet Leaves (RSP13180)
- 0.268 Blueberry Cheesecake (RSP10684)
- 0.271 Master Kush (RSP11182)
- 0.271 Suver Haze (RSP11364)
- 0.272 Serious Happiness (RSP10763)
- 0.272 Liberty Haze (RSP10946)
- 0.275 RKM-2018-001 (RSP11092)
- 0.275 Lift (RSP11378)
- 0.276 Durban Poison 1 (RSP10996)
Most genetically distant strains (All Samples)
- 0.474 Jamaican Lion (RSP12916)
- 0.465 JL 3rd Gen Mother (RSP11214)
- 0.463 Jamaican Lion (RSP12917)
- 0.458 JL yellow (RSP11075)
- 0.449 XY34483 (RSP13511)
- 0.444 Jamaican Lion (RSP12915)
- 0.441 Big Red (RSP13217)
- 0.440 Cherry Blossom (RSP11298)
- 0.427 Jamaican Lion (RSP12920)
- 0.427 Jamaican Lion (RSP12918)
- 0.425 Jamaican Lion (RSP12919)
- 0.425 JL 3rd Gen Mother (RSP11197)
- 0.424 Unknown- Cherry Wine - 002 (RSP11269)
- 0.418 Unknown- Cherry Wine - 003 (RSP11270)
- 0.418 Cherry Blossom (RSP11317)
- 0.418 GMO x Garlic Breath (RSP12507)
- 0.417 BagSeed (RSP12627)
- 0.417 2nd Gen Cherry (RSP11141)
- 0.416 Jamaican Lion (RSP12913)
- 0.415 Unknown- Cherry Wine - 004 (RSP11271)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 81
- Concordance:
- 64
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 6
- Concordance:
- 6
Blockchain Registration Information
- SHASUM Hash
-
c2b493957f1f8a7fca936bdef31b308f eef17ab0af3a1360 154d09741d52a978