Herijuana
RSP 11181
Grower: Patriot Care
General Information
- Sample Name
- Herijuana_21NOV2016
- Accession Date
- June 26, 2019
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
- THC + THCA
- 16.2%
- CBD + CBDA
- 0.1%
- THCV + THCVA
- n/a
- CBC + CBCA
- n/a
- CBG + CBGA
- 1.3%
- CBN + CBNA
- 0.3%
Terpenoids
- α-Bisabolol
- 0.007%
- Borneol
- 0.005%
- Camphene
- 0.004%
- Carene
- n/a
- Caryophyllene oxide
- n/a
- β-Caryophyllene
- 0.085%
- Fenchol
- n/a
- Geraniol
- 0.008%
- α-Humulene
- 0.025%
- Limonene
- 0.086%
- Linalool
- 0.027%
- Myrcene
- 0.037%
- α-Phellandrene
- n/a
- Terpinolene
- 0.001%
- α-Terpineol
- n/a
- α-Terpinene
- n/a
- γ-Terpinene
- n/a
- Total Nerolidol
- 0.02%
- Total Ocimene
- 0.25%
- α-Pinene
- 0.08%
- β-Pinene
- 0.043%
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).
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This chart represents the Illumina sequence coverage over the CBCA synthase gene.
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Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
EMF1-2 | c.710A>C | p.His237Pro | missense variant | moderate | contig885 | 810 | A/C | |
PKSG-2a | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1944616 | C/T |
|
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.948T>G | p.Asp316Glu | missense variant | moderate | contig700 | 1950690 | A/C |
|
PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1392T>A | p.Ser464Arg | missense variant | moderate | contig380 | 285177 | A/T |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
OAC-2 | c.260C>G | p.Ser87Cys | missense variant | moderate | contig931 | 109979 | G/C |
|
OAC-1 | c.260C>G | p.Ser87Cys | missense variant | moderate | contig931 | 118104 | G/C |
|
OAC-1 | c.220A>G | p.Ile74Val | missense variant | moderate | contig931 | 118144 | T/C | |
FAD2-2 | c.190C>T | p.His64Tyr | missense variant | moderate | contig83 | 1803179 | G/A |
|
FAD2-2 | c.161T>A | p.Leu54His | missense variant | moderate | contig83 | 1803208 | A/T |
|
FAD2-2 | c.154G>A | p.Val52Ile | missense variant | moderate | contig83 | 1803215 | C/T |
|
ELF3 | c.358G>A | p.Gly120Arg | missense variant | moderate | contig97 | 242064 | G/A | |
ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
ELF3 | c.772A>G | p.Ser258Gly | missense variant | moderate | contig97 | 242478 | A/G |
|
ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
ELF3 |
c.1230-2_123 |
splice acceptor variant & intron variant | high | contig97 | 243676 | TAG/T | ||
ELF3 | c.1466G>A | p.Ser489Asn | missense variant | moderate | contig97 | 244297 | G/A |
|
ELF3 | c.1630A>G | p.Thr544Ala | missense variant | moderate | contig97 | 244461 | A/G | |
ELF3 |
c.1803_1805d |
p.His601del | disruptive inframe deletion | moderate | contig97 | 244625 | ACAT/A |
|
ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
ELF3 | c.2141C>G | p.Pro714Arg | missense variant | moderate | contig97 | 244972 | C/G | |
ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
aPT4 | c.16G>A | p.Val6Ile | missense variant | moderate | contig121 | 2828672 | G/A |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
AAE1-2 | c.331A>G | p.Asn111Asp | missense variant | moderate | contig81 | 209293 | A/G |
|
AAE1-2 | c.374A>G | p.His125Arg | missense variant | moderate | contig81 | 209336 | A/G |
|
AAE1-2 | c.688G>A | p.Asp230Asn | missense variant | moderate | contig81 | 209650 | G/A |
|
AAE1-2 | c.884C>T | p.Thr295Ile | missense variant | moderate | contig81 | 209846 | C/T |
|
AAE1-2 | c.1006A>G | p.Lys336Glu | missense variant | moderate | contig81 | 209968 | A/G |
|
AAE1-2 | c.1415G>A | p.Ser472Asn | missense variant | moderate | contig81 | 210377 | G/A |
|
AAE1-2 | c.1417A>G | p.Thr473Ala | missense variant | moderate | contig81 | 210379 | A/G |
|
AAE1-2 | c.1434G>T | p.Glu478Asp | missense variant | moderate | contig81 | 210396 | G/T |
|
PHL-1 | c.2623A>G | p.Thr875Ala | missense variant | moderate | contig1439 | 1487174 | T/C |
|
PHL-1 | c.2551A>G | p.Thr851Ala | missense variant | moderate | contig1439 | 1487246 | T/C | |
PHL-1 | c.1387A>G | p.Thr463Ala | missense variant | moderate | contig1439 | 1489811 | T/C | |
PHL-1 | c.407G>A | p.Arg136Gln | missense variant | moderate | contig1439 | 1491441 | C/T | |
PHL-1 | c.176G>A | p.Gly59Glu | missense variant | moderate | contig1439 | 1492817 | C/T |
|
PHL-1 | c.175G>A | p.Gly59Arg | missense variant | moderate | contig1439 | 1492818 | C/T | |
TFL1 | c.304G>A | p.Asp102Asn | missense variant & splice region variant | moderate | contig1636 | 520613 | C/T |
|
TFL1 | c.302-1G>A | splice acceptor variant & intron variant | high | contig1636 | 520616 | C/T | ||
HDS-1 | c.1618A>G | p.Ile540Val | missense variant | moderate | contig1891 | 885936 | T/C | |
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 | c.56C>G | p.Ala19Gly | missense variant | moderate | contig1891 | 889336 | G/C | |
HDS-1 | c.35G>A | p.Cys12Tyr | missense variant | moderate | contig1891 | 889357 | C/T | |
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
|
PIE1-2 | c.6623C>T | p.Ala2208Val | missense variant | moderate | contig1460 | 1184464 | G/A | |
PIE1-2 | c.5932A>G | p.Ile1978Val | missense variant | moderate | contig1460 | 1185552 | T/C | |
PIE1-2 |
c.2083_2085d |
p.Val695del | conservative inframe deletion | moderate | contig1460 | 1189954 | GGAC/G | |
PIE1-2 | c.1872T>A | p.Asp624Glu | missense variant | moderate | contig1460 | 1190252 | A/T | |
PIE1-2 | c.1696G>A | p.Val566Met | missense variant | moderate | contig1460 | 1191534 | C/T |
|
PIE1-2 | c.1683A>T | p.Leu561Phe | missense variant | moderate | contig1460 | 1191547 | T/A |
|
PIE1-2 | c.1630G>C | p.Ala544Pro | missense variant | moderate | contig1460 | 1191600 | C/G | |
PIE1-2 | c.1318A>G | p.Asn440Asp | missense variant | moderate | contig1460 | 1192080 | T/C | |
PIE1-2 | c.1294G>A | p.Asp432Asn | missense variant | moderate | contig1460 | 1192104 | C/T | |
PIE1-2 | c.1289A>G | p.Asp430Gly | missense variant | moderate | contig1460 | 1192109 | T/C |
|
PIE1-2 | c.1279G>A | p.Val427Ile | missense variant | moderate | contig1460 | 1192119 | C/T | |
PIE1-2 | c.982G>A | p.Glu328Lys | missense variant | moderate | contig1460 | 1192416 | C/T | |
PIE1-2 | c.961C>T | p.Arg321Trp | missense variant | moderate | contig1460 | 1192437 | G/A | |
PIE1-2 | c.710C>T | p.Pro237Leu | missense variant | moderate | contig1460 | 1193804 | G/A | |
PIE1-2 | c.637T>A | p.Ser213Thr | missense variant | moderate | contig1460 | 1194421 | A/T | |
EMF2 | c.1772A>G | p.Gln591Arg | missense variant | moderate | contig954 | 3059929 | A/G | |
FT |
c.32_43dupAT |
p.Asn11_Asn1 |
disruptive inframe insertion | moderate | contig1561 | 3124441 |
T/TTAATAATAA |
|
FT |
c.29_43dupAT |
p.Asn10_Asn1 |
disruptive inframe insertion | moderate | contig1561 | 3124441 |
T/TTAATAATAA |
|
FT | c.240C>G | p.Asn80Lys | missense variant | moderate | contig1561 | 3124664 | C/G |
|
AAE1-3 | c.501G>C | p.Leu167Phe | missense variant | moderate | contig976 | 1083524 | C/G |
|
PIE1-1 | c.1066C>T | p.Arg356Trp | missense variant | moderate | contig1225 | 2281326 | C/T | |
PIE1-1 | c.1120G>A | p.Asp374Asn | missense variant | moderate | contig1225 | 2281380 | G/A |
|
PIE1-1 | c.1222C>G | p.Gln408Glu | missense variant | moderate | contig1225 | 2281482 | C/G | |
PIE1-1 | c.1249G>T | p.Val417Leu | missense variant | moderate | contig1225 | 2281509 | G/T | |
PIE1-1 | c.1785A>T | p.Leu595Phe | missense variant | moderate | contig1225 | 2282213 | A/T | |
PIE1-1 | c.1798G>A | p.Val600Met | missense variant | moderate | contig1225 | 2282226 | G/A | |
PIE1-1 | c.6725C>T | p.Ala2242Val | missense variant | moderate | contig1225 | 2289290 | C/T | |
GGR | c.376G>C | p.Glu126Gln | missense variant | moderate | contig2282 | 549368 | G/C | |
GGR | c.382C>T | p.Leu128Phe | missense variant | moderate | contig2282 | 549374 | C/T |
|
GGR | c.456T>A | p.His152Gln | missense variant | moderate | contig2282 | 549448 | T/A |
|
GGR | c.460G>A | p.Asp154Asn | missense variant | moderate | contig2282 | 549452 | G/A |
|
GGR | c.581C>T | p.Ala194Val | missense variant | moderate | contig2282 | 549573 | C/T | |
GGR | c.704A>T | p.His235Leu | missense variant | moderate | contig2282 | 549696 | A/T |
|
PKSB-3 |
c.1850_1852d |
p.Met617dup | disruptive inframe insertion | moderate | contig93 | 3339945 | A/AGAT |
|
Nearest genetic relatives (All Samples)
- 0.228 TropCookies (RSP12097)
- 0.229 White Label 3 (RSP11338)
- 0.236 UnObtanium (RSP11611)
- 0.237 Domnesia (RSP11184)
- 0.240 Durban Poison #1 (RSP11013)
- 0.242 JL 4th Gen 7 (RSP11153)
- 0.248 Doug s Varin (RSP11243)
- 0.249 Blueberry Cheesecake (RSP10646)
- 0.251 Trump x Trump (RSP11466)
- 0.252 Durban Poison #1 (RSP10996)
- 0.252 Grand Daddy Purple (RSP10635)
- 0.264 Badger (RSP11614)
- 0.264 NSPM1 (RSP11362)
- 0.264 Durban Poison (RSP10998)
- 0.265 Gorilla Cookies (RSP11231)
- 0.265 Center Mark (RSP11629)
- 0.266 Mendo Purple (RSP11494)
- 0.267 Serious Happiness (RSP10763)
- 0.268 Harlox (RSP10641)
- 0.268 Hermaphrodite ResearchSample2 (RSP11050)
Most genetically distant strains (All Samples)
- 0.446 Cherry Blossom (RSP11324)
- 0.439 Cherry Blossom (RSP11333)
- 0.435 Cherry Blossom (RSP11311)
- 0.432 Cherry Blossom (RSP11306)
- 0.430 Cherry Blossom (RSP11317)
- 0.428 Northern Skunk (RSP11456)
- 0.427 Cherry Blossom (RSP11325)
- 0.426 Cherry Blossom (RSP11318)
- 0.424 Cherry Blossom (RSP11308)
- 0.422 Cherry Blossom (RSP11335)
- 0.421 80E (RSP11213)
- 0.421 80E (RSP11212)
- 0.420 Cherry Blossom (RSP11300)
- 0.413 CS Indica (RSP11658)
- 0.411 Cherry Blossom (RSP11334)
- 0.409 GG4 (RSP11978)
- 0.409 Tanao Sri-white -80- (RSP11621)
- 0.408 GMO x Garlic Breath (RSP12507)
- 0.408 Cherry Blossom (RSP11314)
- 0.407 Cherry Blossom (RSP11323)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 107
- Concordance:
- 68
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 6
- Concordance:
- 6
Blockchain Registration Information
- Transaction ID
-
66f825d26f96a403
e3532dd86dc7d2f8 2fd0222eb863fc6e a0f7cd0d1d7db9f3 - Stamping Certificate
- Download PDF (859.2 KB)
- SHASUM Hash
-
3885475049e48ecc
4536a45a77a63402 411c4b4d1341aeda e4bbf3a0ced23c3e