Torrey
RSP 11449
Grower: Blue Forest Farms
General Information
- Sample Name
- 30
- Accession Date
- March 31, 2020
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
- DNA Extracted From
- Stem
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type III
File Downloads
Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
PKSG-4a |
c.1191_1193d |
p.Tyr398del | disruptive inframe deletion | moderate | contig700 | 1938600 | AATT/A |
|
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2a | c.-2_1delATA | p.Met1del | start lost & conservative inframe deletion | high | contig700 | 1945632 | ATAT/A |
|
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-2b | c.-2_1dupATA | start lost & conservative inframe insertion | high | contig700 | 1951880 | A/ATAT |
|
|
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b |
c.353_354ins |
p.Gly119fs | frameshift variant | high | contig700 | 2721319 | T/TGG |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 | c.775delT | p.Tyr259fs | frameshift variant | high | contig121 | 2831380 | AT/A |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
HDS-2 | c.679G>C | p.Gly227Arg | missense variant | moderate | contig95 | 1990632 | G/C |
|
Nearest genetic relatives (All Samples)
- 0.253 Tisza (RSP10659)
- 0.258 C-930 lot 211005 (RSP12603)
- 0.260 Tygra (RSP10667)
- 0.263 Tisza (RSP11045)
- 0.263 Santhica 27 (RSP10665)
- 0.267 KYRG-151 (RSP11052)
- 0.268 Carmagnola (RSP11039)
- 0.269 Carmagnola (RSP10982)
- 0.269 Carmagnola (RSP10976)
- 0.270 Carmagnola (RSP10977)
- 0.272 Uniko B (SRR14708278)
- 0.273 Tisza (RSP11044)
- 0.273 Santhica27 (RSP10056)
- 0.275 KYRG-11 (RSP11051)
- 0.275 R2in135 (SRR14708223)
- 0.276 Blueberry Cheesecake (RSP10684)
- 0.277 USO 31 (RSP10981)
- 0.279 Carmagnola (RSP10979)
- 0.280 Carmagnola (RSP10980)
- 0.280 Carmagnola (RSP11037)
Most genetically distant strains (All Samples)
- 0.461 Cherry Blossom (RSP11300)
- 0.460 Cherry Blossom (RSP11301)
- 0.459 Chem 91 (RSP11185)
- 0.432 Medxotic (RSP11410)
- 0.432 Cherry Blossom (RSP11325)
- 0.427 AVIDEKEL 2 0 (RSP11174)
- 0.422 Chematonic -Cannatonic x Chemdawg- (RSP11394)
- 0.421 Cherry Blossom (RSP11312)
- 0.421 JL Cross 13 (RSP11514)
- 0.419 Cherry Blossom (RSP11306)
- 0.419 Cherry Blossom (RSP11318)
- 0.418 Wife (RSP11148)
- 0.418 Cherry Blossom (RSP11323)
- 0.417 Cherry Blossom (RSP11322)
- 0.417 JL Cross 1 (RSP11502)
- 0.416 B52 (SRR14708255)
- 0.416 QLE1 (RSP11451)
- 0.416 Cherry Blossom (RSP11309)
- 0.415 Dave Pineapple (RSP11626)
- 0.415 Wilburs Great Adventure (RSP11727)
Nearest genetic relative in Phylos dataset
Phylos Strain SRR8347101
- Overlapping SNPs:
- 74
- Concordance:
- 53
Nearest genetic relative in Lynch dataset
Lynch Strain SRR3495168
- Overlapping SNPs:
- 5
- Concordance:
- 4
Blockchain Registration Information
- Transaction ID
-
c678025fe8657e61
fe2d3bb7e053e63d dbca7e40af74bab5 737dd36a67e06892 - Stamping Certificate
- Download PDF (39.9 KB)
- SHASUM Hash
-
3c6fa92d4917a3b7
a1c9ec8c6881a210 933f4e06217a2f2f dd14b8a746ea62d9