Powdered Donuts
RSP 13271
Grower: Zamir Punja
General Information
- Sample Name
- Powdered_Donuts__Canna-Root__20241120
- Accession Date
- November 19, 2024
- Reported Plant Sex
- Female
- Report Type
- Whole-Genome Sequencing
- Microbiome
- Krona Plot
- Fungal Microbiome
- Krona Plot
- Bacterial Microbiome
- Krona Plot
- Viral Microbiome
- Krona Plot
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.
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This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).
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This chart represents the Illumina sequence coverage over the CBCA synthase gene.
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Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
No variants to report
Nearest genetic relatives (All Samples)
- 0.121 Powdered Donuts (RSP13270)
- 0.124 PD St-M (RSP13149)
- 0.126 Powdered Donuts (RSP13263)
- 0.128 Powdered Donuts (RSP13272)
- 0.128 Powdered Donuts (RSP13266)
- 0.128 Powdered Donuts (RSP13268)
- 0.130 Powdered Donuts (RSP13273)
- 0.132 PD Lf-M (RSP13150)
- 0.132 Powdered Donuts (RSP13264)
- 0.136 JFG (RSP13085)
- 0.137 Powdered Donuts (RSP13269)
- 0.146 JFG (RSP12927)
- 0.152 Powdered Donuts (RSP13267)
- 0.168 Powdered Donuts (RSP12939)
- 0.169 Dried Leaves (RSP13120)
- 0.180 Powdered Donuts (RSP13265)
- 0.182 JFG (RSP12933)
- 0.234 Purple Urkle (RSP12890)
- 0.238 Skywalker OG (RSP10837)
- 0.239 BF (RSP12931)
Most genetically distant strains (All Samples)
- 0.515 JL 3rd Gen Mother (RSP11214)
- 0.513 Jamaican Lion (RSP12916)
- 0.499 JL yellow (RSP11075)
- 0.498 Jamaican Lion (RSP12917)
- 0.484 Jamaican Lion (RSP12915)
- 0.472 Cherry Blossom (RSP11317)
- 0.472 Northern Skunk (RSP11456)
- 0.468 JL 4th Gen 2 (RSP11194)
- 0.467 Cherry Fog XL (RSP11458)
- 0.465 JL x MC7 (RSP13213)
- 0.463 JL 3rd Gen Mother (RSP11197)
- 0.460 JL 4th Gen 6 (RSP11200)
- 0.458 JL 4th Gen 5 (RSP11199)
- 0.455 Cherry Blossom (RSP11323)
- 0.455 JL 4th Gen 1 (RSP11193)
- 0.454 Cherry Blossom (RSP11330)
- 0.454 Big Red (RSP13217)
- 0.453 Cherry Blossom (RSP11306)
- 0.449 Jamaican Lion (RSP12913)
- 0.448 Cherry Blossom (RSP11325)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 55
- Concordance:
- 40
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 5
- Concordance:
- 5
Blockchain Registration Information
- SHASUM Hash
-
30a4177fd86d3253
d9912ae9104e540c 6c16199023727bee 7ad37fe7c5278719