Powdered Donuts

RSP 13271

Grower: Zamir Punja

General Information

Sample Name
Powdered_Donuts__Canna-Root__20241120
Accession Date
November 19, 2024
Reported Plant Sex
Female
Microbiome
Krona Plot
Fungal Microbiome
Krona Plot
Bacterial Microbiome
Krona Plot
Viral Microbiome
Krona Plot

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Common
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

No information provided.

Terpenoids

No information provided.

Genetic Information

Plant Type
Type I

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 1.44%
Least Heterozygous Most Heterozygous

The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

Y-Ratio Distribution: 0.0185
male female RSP13271

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Variants (THCAS, CBDAS, and CBCAS)

No variants to report

Variants (Select Genes of Interest)

No variants to report

Nearest genetic relatives (All Samples)

0 0.067 0.133 0.200 0.267
closely related moderately related distantly related
  1. 0.121 Powdered Donuts (RSP13270)
  2. 0.124 PD St-M (RSP13149)
  3. 0.126 Powdered Donuts (RSP13263)
  4. 0.128 Powdered Donuts (RSP13272)
  5. 0.128 Powdered Donuts (RSP13266)
  6. 0.128 Powdered Donuts (RSP13268)
  7. 0.130 Powdered Donuts (RSP13273)
  8. 0.132 PD Lf-M (RSP13150)
  9. 0.132 Powdered Donuts (RSP13264)
  10. 0.136 JFG (RSP13085)
  11. 0.137 Powdered Donuts (RSP13269)
  12. 0.146 JFG (RSP12927)
  13. 0.152 Powdered Donuts (RSP13267)
  14. 0.168 Powdered Donuts (RSP12939)
  15. 0.169 Dried Leaves (RSP13120)
  16. 0.180 Powdered Donuts (RSP13265)
  17. 0.182 JFG (RSP12933)
  18. 0.234 Purple Urkle (RSP12890)
  19. 0.238 Skywalker OG (RSP10837)
  20. 0.239 BF (RSP12931)

Most genetically distant strains (All Samples)

0 0.133 0.267 0.400 0.533
closely related moderately related distantly related
  1. 0.515 JL 3rd Gen Mother (RSP11214)
  2. 0.513 Jamaican Lion (RSP12916)
  3. 0.499 JL yellow (RSP11075)
  4. 0.498 Jamaican Lion (RSP12917)
  5. 0.484 Jamaican Lion (RSP12915)
  6. 0.472 Cherry Blossom (RSP11317)
  7. 0.472 Northern Skunk (RSP11456)
  8. 0.468 JL 4th Gen 2 (RSP11194)
  9. 0.467 Cherry Fog XL (RSP11458)
  10. 0.465 JL x MC7 (RSP13213)
  11. 0.463 JL 3rd Gen Mother (RSP11197)
  12. 0.460 JL 4th Gen 6 (RSP11200)
  13. 0.458 JL 4th Gen 5 (RSP11199)
  14. 0.455 Cherry Blossom (RSP11323)
  15. 0.455 JL 4th Gen 1 (RSP11193)
  16. 0.454 Cherry Blossom (RSP11330)
  17. 0.454 Big Red (RSP13217)
  18. 0.453 Cherry Blossom (RSP11306)
  19. 0.449 Jamaican Lion (RSP12913)
  20. 0.448 Cherry Blossom (RSP11325)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR8349389
Overlapping SNPs:
55
Concordance:
40

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495246
Overlapping SNPs:
5
Concordance:
5

Blockchain Registration Information

SHASUM Hash
30a4177fd86d3253d9912ae9104e540c6c16199023727bee7ad37fe7c5278719
QR code for RSP13271

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