Ooh la la THC

RSP 11433

Grower: Mark Freid & David Mintz

General Information

Sample Name
OOL0101
Accession Date
February 26, 2020
Reported Plant Sex
Female
DNA Extracted From
Stem

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Rare
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

No information provided.

Terpenoids

No information provided.

Genetic Information

Plant Type
Type I

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 0.92%
Least Heterozygous Most Heterozygous

The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

Y-Ratio Distribution: 0.0338
male female RSP11433

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Nearest genetic relatives (All Samples)

0 0.067 0.133 0.200 0.267
closely related moderately related distantly related
  1. 0.219 Super Blue Dream (RSP11011)
  2. 0.229 Durban Poison #1 (RSP10996)
  3. 0.230 Original Jamaican Lions (RSP11127)
  4. 0.231 Durban Poison (RSP11014)
  5. 0.232 Blue Dream (RSP11017)
  6. 0.233 JL 4th Gen 7 (RSP11153)
  7. 0.233 Cheese (RSP10460)
  8. 0.234 Blue Dream (RSP11010)
  9. 0.235 Miss X (RSP10999)
  10. 0.237 Blue Dream (RSP11007)
  11. 0.239 Snoops Dream (RSP11003)
  12. 0.241 Blue Dream (RSP11008)
  13. 0.243 UnObtanium (RSP11611)
  14. 0.245 Up Royale (RSP11257)
  15. 0.245 Serious Happiness (RSP10763)
  16. 0.246 Black Jack (RSP10603)
  17. 0.246 Blue Dream (RSP11012)
  18. 0.248 Blueberry Cheesecake (RSP10684)
  19. 0.248 Doug s Varin (RSP11243)
  20. 0.248 Blue Dream (RSP11009)

Most genetically distant strains (All Samples)

0 0.108 0.217 0.325 0.433
closely related moderately related distantly related
  1. 0.432 80E (RSP11213)
  2. 0.422 CS (RSP11208)
  3. 0.420 Feral (RSP11205)
  4. 0.417 80E (RSP11211)
  5. 0.416 Fatso (RSP11741)
  6. 0.416 Cherry Blossom (RSP11311)
  7. 0.411 BagSeed (RSP12627)
  8. 0.409 Chem 91 (RSP11185)
  9. 0.408 80E (RSP11212)
  10. 0.407 Feral (RSP11206)
  11. 0.406 Kush Hemp E1 (RSP11128)
  12. 0.404 CHEM4 (RSP12090)
  13. 0.404 Cherry Blossom (RSP11317)
  14. 0.402 Abacus (RSP11266)
  15. 0.402 Cbot-2019-005 (RSP11133)
  16. 0.402 JL Cross 14 (RSP11515)
  17. 0.401 Carmaleonte (RSP11207)
  18. 0.400 RKM-2018-012 (RSP11103)
  19. 0.400 Cherry Blossom (RSP11314)
  20. 0.399 Red Eye OG (RSP11190)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR4451145
Overlapping SNPs:
71
Concordance:
47

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495303
Overlapping SNPs:
3
Concordance:
3

Blockchain Registration Information

Transaction ID
1ef2960046b927f0627d8bebba823c68b222495868f3e4fc8e54c3a4d27973b4
Stamping Certificate
Download PDF (40.0 KB)
SHASUM Hash
4d08882ac48608a5b7b45ef4b35eccdb9b6a3fb4eab6bfa9e30bcd270684b90f
QR code for RSP11433

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