Double Black Label
RSP 12499
Grower: CBG Seed Source
General Information
- Sample Name
- DBL-LD1002
- Accession Date
- December 8, 2021
- Reported Plant Sex
- Female
- Report Type
- Whole-Genome Sequencing
- DNA Extracted From
- Stem
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
GPPs1 | c.160A>G | p.Lys54Glu | missense variant | moderate | contig676 | 168409 | A/G |
|
GPPs1 | c.744C>G | p.Asp248Glu | missense variant | moderate | contig676 | 168993 | C/G |
|
GPPs1 |
c.807_814del |
p.His270fs | frameshift variant | high | contig676 | 169595 | GTGCATTTT/G |
|
GPPs1 |
c.845_848del |
p.Glu282fs | frameshift variant | high | contig676 | 169629 | TGAAA/T |
|
GPPs1 |
c.857_864del |
p.Ala286fs | frameshift variant | high | contig676 | 169645 | GGCGAAAGA/G |
|
GPPs1 |
c.866_877del |
p.Leu289_Glu |
stop gained & disruptive inframe deletion | high | contig676 | 169655 |
TTACTAGAGCTA |
|
GPPs1 | c.896A>G | p.Asn299Ser | missense variant | moderate | contig676 | 169772 | A/G |
|
GPPs1 |
c.923_927+5d |
p.Val308fs | frameshift variant & splice donor variant & splice region variant & intron variant | high | contig676 | 169798 |
GTTTTGGTACT/ |
|
PHL-2 | c.455A>C | p.Asp152Ala | missense variant | moderate | contig2621 | 339191 | A/C | |
PHL-2 | c.1057A>G | p.Arg353Gly | missense variant | moderate | contig2621 | 340335 | A/G | |
PHL-2 | c.1096G>A | p.Ala366Thr | missense variant | moderate | contig2621 | 340374 | G/A | |
PHL-2 | c.1540A>G | p.Thr514Ala | missense variant | moderate | contig2621 | 340818 | A/G | |
PHL-2 | c.2564T>A | p.Phe855Tyr | missense variant | moderate | contig2621 | 342607 | T/A | |
PHL-2 | c.2578T>A | p.Leu860Ile | missense variant | moderate | contig2621 | 342621 | T/A | |
PHL-2 | c.2756A>C | p.Glu919Ala | missense variant | moderate | contig2621 | 342799 | A/C | |
PHL-2 | c.2783G>A | p.Ser928Asn | missense variant | moderate | contig2621 | 342826 | G/A | |
PHL-2 | c.3002A>G | p.Tyr1001Cys | missense variant | moderate | contig2621 | 343045 | A/G | |
PHL-2 | c.3027G>T | p.Lys1009Asn | missense variant | moderate | contig2621 | 343070 | G/T | |
PHL-2 | c.3033T>G | p.Cys1011Trp | missense variant | moderate | contig2621 | 343076 | T/G | |
PHL-2 | c.3202A>C | p.Thr1068Pro | missense variant | moderate | contig2621 | 343245 | A/C |
|
PHL-2 | c.3209A>G | p.Gln1070Arg | missense variant | moderate | contig2621 | 343252 | A/G | |
PHL-2 | c.3467A>G | p.Gln1156Arg | missense variant | moderate | contig2621 | 343510 | A/G | |
PHL-2 | c.3552delG | p.Lys1185fs | frameshift variant | high | contig2621 | 343593 | CG/C |
|
PKSG-2a | c.781T>A | p.Leu261Ile | missense variant | moderate | contig700 | 1944609 | A/T | |
PKSG-2a | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1944616 | C/T |
|
PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-2b | c.-2_1dupATA | start lost & conservative inframe insertion | high | contig700 | 1951880 | A/ATAT |
|
|
PKSG-4b | c.316+2T>A | splice donor variant & intron variant | high | contig700 | 2723818 | A/T | ||
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
OAC-1 | c.260C>G | p.Ser87Cys | missense variant | moderate | contig931 | 118104 | G/C |
|
FAD2-2 | c.196T>C | p.Phe66Leu | missense variant | moderate | contig83 | 1803173 | A/G |
|
FAD2-2 | c.172G>T | p.Asp58Tyr | missense variant | moderate | contig83 | 1803197 | C/A |
|
FAD2-2 | c.164A>G | p.His55Arg | missense variant | moderate | contig83 | 1803205 | T/C |
|
FAD2-2 | c.161T>A | p.Leu54His | missense variant | moderate | contig83 | 1803208 | A/T |
|
FAD2-2 | c.110C>T | p.Ala37Val | missense variant | moderate | contig83 | 1803259 | G/A |
|
FAD2-2 | c.64G>T | p.Ala22Ser | missense variant | moderate | contig83 | 1803305 | C/A |
|
ELF4 | c.407G>C | p.Arg136Pro | missense variant | moderate | contig869 | 622163 | C/G |
|
ELF4 | c.144T>A | p.Asp48Glu | missense variant | moderate | contig869 | 622426 | A/T |
|
ELF3 | c.358G>A | p.Gly120Arg | missense variant | moderate | contig97 | 242064 | G/A | |
ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
ELF3 | c.772A>G | p.Ser258Gly | missense variant | moderate | contig97 | 242478 | A/G |
|
ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
ELF3 |
c.1230-2_123 |
splice acceptor variant & intron variant | high | contig97 | 243676 | TAG/T | ||
ELF3 | c.1466G>A | p.Ser489Asn | missense variant | moderate | contig97 | 244297 | G/A |
|
ELF3 | c.1630A>G | p.Thr544Ala | missense variant | moderate | contig97 | 244461 | A/G | |
ELF3 |
c.1803_1805d |
p.His601del | disruptive inframe deletion | moderate | contig97 | 244625 | ACAT/A |
|
ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
ELF3 | c.2141C>G | p.Pro714Arg | missense variant | moderate | contig97 | 244972 | C/G | |
ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
aPT4 | c.16G>A | p.Val6Ile | missense variant | moderate | contig121 | 2828672 | G/A |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
AAE1-2 | c.331A>G | p.Asn111Asp | missense variant | moderate | contig81 | 209293 | A/G |
|
AAE1-2 | c.884C>T | p.Thr295Ile | missense variant | moderate | contig81 | 209846 | C/T |
|
AAE1-2 | c.1006A>G | p.Lys336Glu | missense variant | moderate | contig81 | 209968 | A/G |
|
PHL-1 | c.2651C>T | p.Ala884Val | missense variant | moderate | contig1439 | 1487146 | G/A | |
PHL-1 | c.2623A>G | p.Thr875Ala | missense variant | moderate | contig1439 | 1487174 | T/C |
|
PHL-1 | c.2561A>T | p.Asn854Ile | missense variant | moderate | contig1439 | 1487236 | T/A | |
PHL-1 | c.2551A>G | p.Thr851Ala | missense variant | moderate | contig1439 | 1487246 | T/C | |
PHL-1 | c.1387A>G | p.Thr463Ala | missense variant | moderate | contig1439 | 1489811 | T/C | |
Edestin | c.40G>A | p.Ala14Thr | missense variant | moderate | contig850 | 3065250 | C/T |
|
Edestin | c.17C>T | p.Ser6Leu | missense variant | moderate | contig850 | 3065273 | G/A |
|
Edestin | c.16T>C | p.Ser6Pro | missense variant | moderate | contig850 | 3065274 | A/G |
|
TFL1 | c.302-1G>A | splice acceptor variant & intron variant | high | contig1636 | 520616 | C/T | ||
HDS-1 | c.1618A>G | p.Ile540Val | missense variant | moderate | contig1891 | 885936 | T/C | |
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 | c.136G>A | p.Val46Ile | missense variant | moderate | contig1891 | 889256 | C/T | |
HDS-1 | c.56C>G | p.Ala19Gly | missense variant | moderate | contig1891 | 889336 | G/C | |
HDS-1 | c.35G>A | p.Cys12Tyr | missense variant | moderate | contig1891 | 889357 | C/T | |
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
|
PIE1-2 | c.1872T>A | p.Asp624Glu | missense variant | moderate | contig1460 | 1190252 | A/T | |
EMF2 | c.1772A>G | p.Gln591Arg | missense variant | moderate | contig954 | 3059929 | A/G | |
FT |
c.32_43dupAT |
p.Asn11_Asn1 |
disruptive inframe insertion | moderate | contig1561 | 3124441 |
T/TTAATAATAA |
|
FT | c.240C>G | p.Asn80Lys | missense variant | moderate | contig1561 | 3124664 | C/G |
|
FLD | c.2981T>C | p.Met994Thr | missense variant | moderate | contig1450 | 2044012 | A/G | |
FLD | c.2976A>C | p.Gln992His | missense variant | moderate | contig1450 | 2044017 | T/G |
|
FLD | c.2964C>A | p.Asp988Glu | missense variant | moderate | contig1450 | 2044029 | G/T | |
FLD | c.2929T>C | p.Phe977Leu | missense variant | moderate | contig1450 | 2044103 | A/G | |
FLD | c.125G>A | p.Ser42Asn | missense variant | moderate | contig1450 | 2047909 | C/T | |
AAE1-3 | c.722G>A | p.Arg241Lys | missense variant | moderate | contig976 | 1083132 | C/T |
|
AAE1-3 | c.659G>A | p.Arg220Gln | missense variant | moderate | contig976 | 1083195 | C/T |
|
AAE1-3 | c.634G>C | p.Gly212Arg | missense variant | moderate | contig976 | 1083220 | C/G |
|
AAE1-3 | c.199A>G | p.Asn67Asp | missense variant | moderate | contig976 | 1083876 | T/C |
|
AAE1-3 | c.188A>G | p.Asn63Ser | missense variant | moderate | contig976 | 1083887 | T/C |
|
PIE1-1 | c.100G>A | p.Glu34Lys | missense variant | moderate | contig1225 | 2277786 | G/A | |
PIE1-1 | c.773A>G | p.Asn258Ser | missense variant & splice region variant | moderate | contig1225 | 2279897 | A/G | |
PIE1-1 | c.815C>T | p.Pro272Leu | missense variant | moderate | contig1225 | 2279939 | C/T | |
PIE1-1 | c.1222C>G | p.Gln408Glu | missense variant | moderate | contig1225 | 2281482 | C/G | |
PIE1-1 | c.3614A>G | p.Lys1205Arg | missense variant | moderate | contig1225 | 2285229 | A/G | |
PIE1-1 | c.3619G>A | p.Val1207Met | missense variant | moderate | contig1225 | 2285234 | G/A |
|
PIE1-1 | c.6725C>T | p.Ala2242Val | missense variant | moderate | contig1225 | 2289290 | C/T | |
PIE1-1 | c.6875T>C | p.Leu2292Ser | missense variant | moderate | contig1225 | 2289440 | T/C | |
GGR | c.232G>C | p.Val78Leu | missense variant | moderate | contig2282 | 549224 | G/C |
|
GGR | c.362A>T | p.Tyr121Phe | missense variant | moderate | contig2282 | 549354 | A/T |
|
GGR | c.456T>A | p.His152Gln | missense variant | moderate | contig2282 | 549448 | T/A |
|
GGR | c.460G>A | p.Asp154Asn | missense variant | moderate | contig2282 | 549452 | G/A |
|
GGR | c.541G>A | p.Val181Ile | missense variant | moderate | contig2282 | 549533 | G/A |
|
GGR | c.679G>A | p.Glu227Lys | missense variant | moderate | contig2282 | 549671 | G/A |
|
GGR | c.704A>T | p.His235Leu | missense variant | moderate | contig2282 | 549696 | A/T |
|
PKSB-3 | c.1652A>G | p.Glu551Gly | missense variant | moderate | contig93 | 3339759 | A/G |
|
PKSB-3 | c.1901C>G | p.Ala634Gly | missense variant | moderate | contig93 | 3340008 | C/G |
|
Nearest genetic relatives (All Samples)
- 0.199 CBG #30 (RSP11447)
- 0.210 CBG Fiber (RSP11440)
- 0.213 CBG Berry (RSP11445)
- 0.218 Doug s Varin (RSP11243)
- 0.222 CBG-#40 (RSP11444)
- 0.223 Electra (RSP11366)
- 0.228 Serious Happiness (RSP10763)
- 0.233 Jolly Rancher (RSP11639)
- 0.245 Lift (RSP11378)
- 0.247 Blue Dream (RSP11004)
- 0.248 Blue Dream (RSP11017)
- 0.251 Super Blue Dream (RSP11011)
- 0.252 New BSR (RSP12104)
- 0.252 Whitey (RSP11363)
- 0.253 CBG Berry (RSP11446)
- 0.254 Ringo s Angel (RSP10085)
- 0.255 Blue Dream (RSP11006)
- 0.258 SourD (RSP12092)
- 0.258 Blue Dream (RSP11010)
- 0.258 Pie Hoe (RSP11073)
Most genetically distant strains (All Samples)
- 0.437 Tanao Sri -46- (RSP11486)
- 0.436 JL yellow (RSP11075)
- 0.425 Cherry Blossom (RSP11323)
- 0.424 JL 3rd Gen Mother (RSP11214)
- 0.416 JL 3rd Gen Mother (RSP11197)
- 0.415 Cherry Blossom (RSP11306)
- 0.412 Cherry Blossom (RSP11328)
- 0.412 JL 4th Gen 5 (RSP11199)
- 0.411 YMCM (RSP11416)
- 0.410 80E (RSP11213)
- 0.410 Unknown--Cherry Wine---001- (RSP11268)
- 0.408 Brunswick High (RSP11164)
- 0.404 JL Cross 25 (RSP11526)
- 0.404 Cherry Blossom (RSP11301)
- 0.404 Unknown--Cherry Wine---003- (RSP11270)
- 0.402 Cherry Blossom (RSP11318)
- 0.402 Cherry Blossom (RSP11325)
- 0.401 Northern Lights (RSP11501)
- 0.398 Cherry Blossom (RSP11300)
- 0.397 JL 4th Gen 6 (RSP11200)
Nearest genetic relative in Phylos dataset
Phylos Strain SRR8346845
- Overlapping SNPs:
- 45
- Concordance:
- 28
Nearest genetic relative in Lynch dataset
Lynch Strain SRR3495159
- Overlapping SNPs:
- 3
- Concordance:
- 3
Blockchain Registration Information
- Transaction ID
-
a79d5648ed9acc61
78039603d2e5f4ce 7767583eb55b6969 db20e24b371ecb3b - Stamping Certificate
- Download PDF (39.7 KB)
- SHASUM Hash
-
adcdc7170d246411
fef4b4e642f4fd5d b8d1534e4da1a2ae 103de5ddced2f872