#10 Gwendolyn
RSP 11653
Grower: Kevin McKernan
General Information
- Accession Date
- September 23, 2020
- Reported Plant Sex
- not reported
- Report Type
- CannSNP90
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
Summary of Deletions
THCAS
- Correlation:
- 0.45
- Call:
- intact
CBDAS
- Correlation:
- 0.97
- Call:
- deleted
CBCAS
- Correlation:
- 0.39
- Call:
- intact
Plant Sex
- Correlation:
- 0.93
- Call:
- female
Variants (THCAS, CBDAS, and CBCAS)
THCAS | c.424G>A | p.Val142Ile | missense variant | moderate | contig741 | 4417404 | C/T |
|
THCAS | c.385G>A | p.Val129Ile | missense variant | moderate | contig741 | 4417443 | C/T |
|
THCAS | c.355A>T | p.Met119Leu | missense variant | moderate | contig741 | 4417473 | T/A |
|
THCAS | c.187A>C | p.Ile63Leu | missense variant | moderate | contig741 | 4417641 | T/G |
Variants (Select Genes of Interest)
PKSA-3b | c.298G>A | p.Ala100Thr | missense variant | moderate | contig705 | 2271640 | C/T | |
EMF1-2 | c.710A>C | p.His237Pro | missense variant | moderate | contig885 | 810 | A/C | |
PHL-2 | c.455A>C | p.Asp152Ala | missense variant | moderate | contig2621 | 339191 | A/C | |
PHL-2 | c.1057A>G | p.Arg353Gly | missense variant | moderate | contig2621 | 340335 | A/G | |
PHL-2 | c.1096G>A | p.Ala366Thr | missense variant | moderate | contig2621 | 340374 | G/A | |
PHL-2 | c.1540A>G | p.Thr514Ala | missense variant | moderate | contig2621 | 340818 | A/G | |
PHL-2 | c.2564T>A | p.Phe855Tyr | missense variant | moderate | contig2621 | 342607 | T/A | |
PHL-2 | c.2578T>A | p.Leu860Ile | missense variant | moderate | contig2621 | 342621 | T/A | |
PHL-2 | c.2783G>A | p.Ser928Asn | missense variant | moderate | contig2621 | 342826 | G/A | |
PHL-2 |
c.2903_2905d |
p.Ser968dup | disruptive inframe insertion | moderate | contig2621 | 342939 | T/TGCA | |
PHL-2 | c.3002A>G | p.Tyr1001Cys | missense variant | moderate | contig2621 | 343045 | A/G | |
PHL-2 | c.3027G>T | p.Lys1009Asn | missense variant | moderate | contig2621 | 343070 | G/T | |
PHL-2 | c.3033T>G | p.Cys1011Trp | missense variant | moderate | contig2621 | 343076 | T/G | |
PHL-2 | c.3209A>G | p.Gln1070Arg | missense variant | moderate | contig2621 | 343252 | A/G | |
PHL-2 | c.3467A>G | p.Gln1156Arg | missense variant | moderate | contig2621 | 343510 | A/G | |
PKSG-4a | c.1000T>C | p.Tyr334His | missense variant | moderate | contig700 | 1938411 | T/C | |
PKSG-2a | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1944238 | A/T | |
PKSG-2a | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1944273 | T/C | |
PKSG-2a | c.995C>T | p.Ser332Phe | missense variant | moderate | contig700 | 1944395 | G/A | |
PKSG-2a | c.781T>A | p.Leu261Ile | missense variant | moderate | contig700 | 1944609 | A/T | |
PKSG-2a | c.623T>C | p.Phe208Ser | missense variant | moderate | contig700 | 1944767 | A/G |
|
PKSG-2a | c.224A>G | p.Lys75Arg | missense variant | moderate | contig700 | 1945166 | T/C | |
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
PKSG-2b | c.224A>G | p.Lys75Arg | missense variant | moderate | contig700 | 1951414 | T/C | |
PKSG-2b | c.167C>G | p.Thr56Ser | missense variant | moderate | contig700 | 1951471 | G/C | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
OAC-2 | c.220A>G | p.Ile74Val | missense variant | moderate | contig931 | 110019 | T/C | |
OAC-1 | c.220A>G | p.Ile74Val | missense variant | moderate | contig931 | 118144 | T/C | |
ELF3 | c.358G>A | p.Gly120Arg | missense variant | moderate | contig97 | 242064 | G/A | |
ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
ELF3 | c.574A>G | p.Asn192Asp | missense variant | moderate | contig97 | 242280 | A/G | |
ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
ELF3 |
c.1230-2_123 |
splice acceptor variant & intron variant | high | contig97 | 243676 | TAG/T | ||
ELF3 | c.1630A>G | p.Thr544Ala | missense variant | moderate | contig97 | 244461 | A/G | |
ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
ELF3 | c.2141C>G | p.Pro714Arg | missense variant | moderate | contig97 | 244972 | C/G | |
ELF3 | c.2198delG | p.Arg733fs | frameshift variant | high | contig97 | 245028 | CG/C | |
ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
PHL-1 | c.2651C>T | p.Ala884Val | missense variant | moderate | contig1439 | 1487146 | G/A | |
PHL-1 | c.2561A>T | p.Asn854Ile | missense variant | moderate | contig1439 | 1487236 | T/A | |
PHL-1 | c.2551A>G | p.Thr851Ala | missense variant | moderate | contig1439 | 1487246 | T/C | |
PHL-1 | c.1387A>G | p.Thr463Ala | missense variant | moderate | contig1439 | 1489811 | T/C | |
TFL1 | c.302-1G>A | splice acceptor variant & intron variant | high | contig1636 | 520616 | C/T | ||
HDS-1 | c.1618A>G | p.Ile540Val | missense variant | moderate | contig1891 | 885936 | T/C | |
HDS-1 | c.136G>A | p.Val46Ile | missense variant | moderate | contig1891 | 889256 | C/T | |
HDS-1 | c.56C>G | p.Ala19Gly | missense variant | moderate | contig1891 | 889336 | G/C | |
HDS-1 | c.35G>A | p.Cys12Tyr | missense variant | moderate | contig1891 | 889357 | C/T | |
PIE1-2 | c.6773T>C | p.Leu2258Ser | missense variant | moderate | contig1460 | 1184314 | A/G | |
PIE1-2 | c.6653A>G | p.Asn2218Ser | missense variant | moderate | contig1460 | 1184434 | T/C | |
PIE1-2 | c.6636T>G | p.Asp2212Glu | missense variant | moderate | contig1460 | 1184451 | A/C | |
PIE1-2 | c.6307A>C | p.Lys2103Gln | missense variant | moderate | contig1460 | 1185177 | T/G | |
PIE1-2 | c.6055C>T | p.Leu2019Phe | missense variant | moderate | contig1460 | 1185429 | G/A | |
PIE1-2 | c.5932A>G | p.Ile1978Val | missense variant | moderate | contig1460 | 1185552 | T/C | |
PIE1-2 | c.5132T>C | p.Ile1711Thr | missense variant | moderate | contig1460 | 1186607 | A/G |
|
PIE1-2 | c.3512A>G | p.Lys1171Arg | missense variant | moderate | contig1460 | 1188528 | T/C | |
PIE1-2 |
c.2083_2085d |
p.Val695del | conservative inframe deletion | moderate | contig1460 | 1189954 | GGAC/G | |
PIE1-2 | c.2072A>G | p.His691Arg | missense variant | moderate | contig1460 | 1189968 | T/C | |
PIE1-2 | c.1872T>A | p.Asp624Glu | missense variant | moderate | contig1460 | 1190252 | A/T | |
PIE1-2 | c.1630G>C | p.Ala544Pro | missense variant | moderate | contig1460 | 1191600 | C/G | |
PIE1-2 | c.1318A>G | p.Asn440Asp | missense variant | moderate | contig1460 | 1192080 | T/C | |
PIE1-2 | c.1294G>A | p.Asp432Asn | missense variant | moderate | contig1460 | 1192104 | C/T | |
PIE1-2 | c.1279G>A | p.Val427Ile | missense variant | moderate | contig1460 | 1192119 | C/T | |
PIE1-2 | c.1156T>G | p.Trp386Gly | missense variant | moderate | contig1460 | 1192242 | A/C | |
PIE1-2 | c.1144G>T | p.Val382Leu | missense variant | moderate | contig1460 | 1192254 | C/A |
|
PIE1-2 | c.1117C>G | p.Gln373Glu | missense variant | moderate | contig1460 | 1192281 | G/C | |
PIE1-2 | c.1093G>A | p.Gly365Ser | missense variant | moderate | contig1460 | 1192305 | C/T | |
PIE1-2 | c.1015G>A | p.Asp339Asn | missense variant | moderate | contig1460 | 1192383 | C/T | |
PIE1-2 | c.982G>A | p.Glu328Lys | missense variant | moderate | contig1460 | 1192416 | C/T | |
PIE1-2 | c.961C>T | p.Arg321Trp | missense variant | moderate | contig1460 | 1192437 | G/A | |
PIE1-2 | c.710C>T | p.Pro237Leu | missense variant | moderate | contig1460 | 1193804 | G/A | |
PIE1-2 | c.637T>A | p.Ser213Thr | missense variant | moderate | contig1460 | 1194421 | A/T | |
PIE1-2 | c.349C>T | p.Pro117Ser | missense variant & splice region variant | moderate | contig1460 | 1195017 | G/A |
|
EMF2 | c.1772A>G | p.Gln591Arg | missense variant | moderate | contig954 | 3059929 | A/G | |
FT | c.13C>G | p.Leu5Val | missense variant | moderate | contig1561 | 3124437 | C/G | |
FLD | c.2981T>C | p.Met994Thr | missense variant | moderate | contig1450 | 2044012 | A/G | |
FLD | c.2964C>A | p.Asp988Glu | missense variant | moderate | contig1450 | 2044029 | G/T | |
FLD | c.2929T>C | p.Phe977Leu | missense variant | moderate | contig1450 | 2044103 | A/G | |
FLD | c.125G>A | p.Ser42Asn | missense variant | moderate | contig1450 | 2047909 | C/T | |
PKSA-3a | c.298G>A | p.Ala100Thr | missense variant | moderate | contig1357 | 1144811 | G/A |
|
AAE1-3 | c.3G>A | p.Met1? | start lost | high | contig976 | 1084072 | C/T | |
PIE1-1 | c.100G>A | p.Glu34Lys | missense variant | moderate | contig1225 | 2277786 | G/A | |
PIE1-1 | c.742T>A | p.Ser248Thr | missense variant | moderate | contig1225 | 2279320 | T/A | |
PIE1-1 | c.773A>G | p.Asn258Ser | missense variant & splice region variant | moderate | contig1225 | 2279897 | A/G | |
PIE1-1 | c.815C>T | p.Pro272Leu | missense variant | moderate | contig1225 | 2279939 | C/T | |
PIE1-1 | c.1066C>T | p.Arg356Trp | missense variant | moderate | contig1225 | 2281326 | C/T | |
PIE1-1 | c.1222C>G | p.Gln408Glu | missense variant | moderate | contig1225 | 2281482 | C/G | |
PIE1-1 | c.1249G>T | p.Val417Leu | missense variant | moderate | contig1225 | 2281509 | G/T | |
PIE1-1 | c.1384G>A | p.Val462Ile | missense variant | moderate | contig1225 | 2281644 | G/A | |
PIE1-1 | c.1394A>G | p.Asp465Gly | missense variant | moderate | contig1225 | 2281654 | A/G | |
PIE1-1 | c.1399G>A | p.Asp467Asn | missense variant | moderate | contig1225 | 2281659 | G/A | |
PIE1-1 | c.1454T>C | p.Val485Ala | missense variant | moderate | contig1225 | 2281714 | T/C |
|
PIE1-1 |
c.1548_1549i |
p.Gln516_Glu |
conservative inframe insertion | moderate | contig1225 | 2281807 | A/AGAT | |
PIE1-1 | c.1785A>T | p.Leu595Phe | missense variant | moderate | contig1225 | 2282213 | A/T | |
PIE1-1 | c.2174A>G | p.His725Arg | missense variant | moderate | contig1225 | 2283789 | A/G |
|
PIE1-1 |
c.2185_2187d |
p.Val729del | conservative inframe deletion | moderate | contig1225 | 2283796 | AGTC/A |
|
PIE1-1 | c.3614A>G | p.Lys1205Arg | missense variant | moderate | contig1225 | 2285229 | A/G | |
PIE1-1 | c.3869A>C | p.Asn1290Thr | missense variant | moderate | contig1225 | 2285484 | A/C | |
PIE1-1 | c.5234T>C | p.Ile1745Thr | missense variant | moderate | contig1225 | 2287152 | T/C |
|
PIE1-1 | c.6041T>C | p.Met2014Thr | missense variant | moderate | contig1225 | 2288214 | T/C |
|
PIE1-1 | c.6409A>C | p.Lys2137Gln | missense variant | moderate | contig1225 | 2288582 | A/C | |
PIE1-1 | c.6725C>T | p.Ala2242Val | missense variant | moderate | contig1225 | 2289290 | C/T | |
PIE1-1 | c.6875T>C | p.Leu2292Ser | missense variant | moderate | contig1225 | 2289440 | T/C | |
GGR | c.376G>C | p.Glu126Gln | missense variant | moderate | contig2282 | 549368 | G/C | |
GGR | c.581C>T | p.Ala194Val | missense variant | moderate | contig2282 | 549573 | C/T |
Nearest genetic relatives (All Samples)
- 0.082 Girl Scout Cookies (RSP11651)
- 0.087 Girl Scout Cookies (RSP11649)
- 0.092 Girl Scout Cookies (RSP11650)
- 0.110 JL Cross 78 (RSP11579)
- 0.112 Girl Scout Cookies (RSP11647)
- 0.112 JL Cross 77 (RSP11578)
- 0.123 Unknown (RSP11645)
- 0.124 Harlox (RSP11178)
- 0.125 JL Cross 24 (RSP11525)
- 0.126 TI-18 (RSP11595)
- 0.126 TI-19 (RSP11592)
- 0.126 JL x NSPM1 2 (RSP11480)
- 0.126 JL Cross 80 (RSP11581)
- 0.127 JL Cross 40 (RSP11541)
- 0.127 Pineapple Haze (RSP11648)
- 0.129 JL Cross 54 (RSP11555)
- 0.129 JL Cross 27 (RSP11528)
- 0.129 Alaska USA (RSP11171)
- 0.129 JL Cross 32 (RSP11533)
- 0.130 JL Cross 48 (RSP11549)
Most genetically distant strains (All Samples)
- 0.244 Feral (RSP11205)
- 0.240 CS (RSP11208)
- 0.235 Tiborszallasie (RSP11210)
- 0.233 Fedora 17 (RSP11203)
- 0.230 Carmaleonte (RSP11207)
- 0.228 Feral (RSP11206)
- 0.227 Carmagnola USO 31 (RSP11204)
- 0.222 Eletta Campana (RSP11209)
- 0.221 80E (RSP11212)
- 0.214 80E (RSP11211)
- 0.214 80E (RSP11213)
- 0.201 Goomendaze (RSP11462)
- 0.199 JL 4th Gen 6 (RSP11200)
- 0.196 JL 3rd Gen Father (RSP11196)
- 0.195 Arcata Trainwreck (RSP11176)
- 0.193 Cbot-2019-005 (RSP11133)
- 0.192 Unknown- Cherry Wine - 004 (RSP11271)
- 0.192 TI-7 (RSP11601)
- 0.189 Chematonic Cannatonic x Chemdawg (RSP11394)
- 0.186 Unknown- Cherry Wine - 003 (RSP11270)
Nearest genetic relative in Phylos dataset
Phylos Strain SRR4448622
- Overlapping SNPs:
- 81
- Concordance:
- 54
Nearest genetic relative in Lynch dataset
Lynch Strain SRR3495164
- Overlapping SNPs:
- 4
- Concordance:
- 4
Blockchain Registration Information
- Transaction ID
-
119a23847bde9f3a
5f812366c27c83ea 9565d56de7ff8af1 dff073610ec8b764 - Stamping Certificate
- Download PDF (39.7 KB)
- SHASUM Hash
-
6550f80516c3746f
1806dea028ce91b6 1f034800779857f3 7154c848b8387a68