Advanced Strain Search

Ice Cream Cake TC

RSP 12583

Grower: Kamino LLC

General Information

Accession Date
January 27, 2022
Reported Plant Sex
Female
Report Type
CannSNP90

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Common
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

No information provided.

Terpenoids

No information provided.

Genetic Information

Plant Type
Type I

File Downloads

This chart represents the Log-R Ratio (LRR) over variants in the region of the THCA synthase gene. A high correlation between the LRR and samples with a known deletion in THCA synthase indicates the THCA region is deleted and a low correlation indicates it is intact.

THCAS Log-R Ratio
intact deleted RSP12583

This chart represents the Log-R Ratio (LRR) over variants in the region of the CBDA synthase gene. A high correlation between the LRR and samples with a known deletion in CBDA synthase indicates the CBDA region is deleted and a low correlation indicates it is intact.

CBDAS Log-R Ratio
intact deleted RSP12583

This chart represents the Log-R Ratio (LRR) over variants in the region of the CBCA synthase gene. A high correlation between the LRR and samples with a known deletion in CBCA synthase indicates the CBCA region is deleted and a low correlation indicates it is intact.

CBCAS Log-R Ratio
intact deleted RSP12583

This chart represents the Log-R Ratio (LRR) over variants in the Y-contigs. A high correlation between the LRR and samples which are known Females indicates these Y-contigs are deleted in this sample and a low correlation indicates that the Y-contigs are not deleted and is likely Male.

Plant Sex Log-R Ratio
male female RSP12583

Summary of Deletions

THCAS

Correlation:
-0.13
Call:
intact

CBDAS

Correlation:
0.96
Call:
deleted

CBCAS

Correlation:
0.3
Call:
intact

Plant Sex

Correlation:
0.88
Call:
female

Variants (THCAS, CBDAS, and CBCAS)
THCAS c.749C>A p.Ala250Asp missense variant moderate contig741 4417079

IGV: Start, Jump

G/T
NGS:
0.127
C90:
0.632
THCAS c.424G>A p.Val142Ile missense variant moderate contig741 4417404

IGV: Start, Jump

C/T
NGS:
0.000
C90:
0.761
THCAS c.385G>A p.Val129Ile missense variant moderate contig741 4417443

IGV: Start, Jump

C/T
NGS:
0.000
C90:
0.947
THCAS c.355A>T p.Met119Leu missense variant moderate contig741 4417473

IGV: Start, Jump

T/A
NGS:
0.000
C90:
0.962
THCAS c.187A>C p.Ile63Leu missense variant moderate contig741 4417641

IGV: Start, Jump

T/G
NGS:
0.059
C90:
0.679

Variants (Select Genes of Interest)
PKSG-4a

UniProt

c.1000T>C p.Tyr334His missense variant moderate contig700 1938411

IGV: Start, Jump

T/C
NGS:
0.002
C90:
0.804
PKSG-2a

UniProt

c.1117A>G p.Ile373Val missense variant moderate contig700 1944273

IGV: Start, Jump

T/C
NGS:
0.101
C90:
0.967
PKSG-2a

UniProt

c.995C>T p.Ser332Phe missense variant moderate contig700 1944395

IGV: Start, Jump

G/A
NGS:
0.015
C90:
0.598
PKSG-2a

UniProt

c.623T>C p.Phe208Ser missense variant moderate contig700 1944767

IGV: Start, Jump

A/G
NGS:
0.000
C90:
0.598
PKSG-2a

UniProt

c.224A>G p.Lys75Arg missense variant moderate contig700 1945166

IGV: Start, Jump

T/C
NGS:
0.143
C90:
0.962
PKSG-2b

UniProt

c.774G>A p.Met258Ile missense variant moderate contig700 1950864

IGV: Start, Jump

C/T
NGS:
0.366
C90:
0.947
PKSG-2b

UniProt

c.230T>C p.Val77Ala missense variant moderate contig700 1951408

IGV: Start, Jump

A/G
NGS:
0.134
C90:
0.646
PKSG-2b

UniProt

c.224A>G p.Lys75Arg missense variant moderate contig700 1951414

IGV: Start, Jump

T/C
NGS:
0.151
C90:
0.957
PKSG-2b

UniProt

c.167C>G p.Thr56Ser missense variant moderate contig700 1951471

IGV: Start, Jump

G/C
NGS:
0.103
C90:
0.947
PKSG-2b

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1951851

IGV: Start, Jump

T/A
NGS:
0.844
C90:
0.880
PKSG-4b

UniProt

c.523C>T p.His175Tyr missense variant moderate contig700 2721150

IGV: Start, Jump

G/A
NGS:
0.112
C90:
0.325
PKSG-4b

UniProt

c.489delT p.Phe163fs frameshift variant high contig700 2721183

IGV: Start, Jump

CA/C
NGS:
0.792
C90:
0.761
PKSG-4b

UniProt

c.316+2T>A splice donor variant & intron variant high contig700 2723818

IGV: Start, Jump

A/T
NGS:
0.070
C90:
0.689
DXR-2

UniProt

c.431C>G p.Ala144Gly missense variant moderate contig380 287760

IGV: Start, Jump

G/C
NGS:
0.182
C90:
0.550
ELF3

UniProt

c.358G>A p.Gly120Arg missense variant moderate contig97 242064

IGV: Start, Jump

G/A
NGS:
0.099
C90:
0.493
ELF3

UniProt

c.520A>C p.Asn174His missense variant moderate contig97 242226

IGV: Start, Jump

A/C
NGS:
0.094
C90:
0.502
ELF3

UniProt

c.812G>C p.Gly271Ala missense variant moderate contig97 242518

IGV: Start, Jump

G/C
NGS:
0.114
C90:
0.938
ELF3

UniProt

c.1230-2_1230-1delAG splice acceptor variant & intron variant high contig97 243676

IGV: Start, Jump

TAG/T
NGS:
0.088
C90:
0.450
ELF3

UniProt

c.1630A>G p.Thr544Ala missense variant moderate contig97 244461

IGV: Start, Jump

A/G
NGS:
0.103
C90:
0.545
ELF3

UniProt

c.1966C>G p.Pro656Ala missense variant moderate contig97 244797

IGV: Start, Jump

C/G
NGS:
0.123
C90:
0.632
ELF3

UniProt

c.2141C>G p.Pro714Arg missense variant moderate contig97 244972

IGV: Start, Jump

C/G
NGS:
0.088
C90:
0.335
ELF3

UniProt

c.2198delG p.Arg733fs frameshift variant high contig97 245028

IGV: Start, Jump

CG/C
NGS:
0.002
C90:
0.612
ELF3

UniProt

c.2198G>T p.Arg733Leu missense variant moderate contig97 245029

IGV: Start, Jump

G/T
NGS:
0.125
C90:
0.531
aPT1

UniProt

c.406A>G p.Ile136Val missense variant moderate contig121 2839605

IGV: Start, Jump

A/G
NGS:
0.579
C90:
0.761
aPT1

UniProt

c.629C>T p.Thr210Ile missense variant moderate contig121 2840237

IGV: Start, Jump

C/T
NGS:
0.561
C90:
0.598
PHL-1

UniProt

c.2651C>T p.Ala884Val missense variant moderate contig1439 1487146

IGV: Start, Jump

G/A
NGS:
0.044
C90:
0.622
PHL-1

UniProt

c.2561A>T p.Asn854Ile missense variant moderate contig1439 1487236

IGV: Start, Jump

T/A
NGS:
0.046
C90:
0.612
PHL-1

UniProt

c.2551A>G p.Thr851Ala missense variant moderate contig1439 1487246

IGV: Start, Jump

T/C
NGS:
0.116
C90:
0.890
PHL-1

UniProt

c.1387A>G p.Thr463Ala missense variant moderate contig1439 1489811

IGV: Start, Jump

T/C
NGS:
0.107
C90:
0.904
TFL1

UniProt

c.302-1G>A splice acceptor variant & intron variant high contig1636 520616

IGV: Start, Jump

C/T
NGS:
0.103
C90:
0.794
HDS-1

UniProt

c.1618A>G p.Ile540Val missense variant moderate contig1891 885936

IGV: Start, Jump

T/C
NGS:
0.099
C90:
0.861
HDS-1

UniProt

c.56C>G p.Ala19Gly missense variant moderate contig1891 889336

IGV: Start, Jump

G/C
NGS:
0.125
C90:
0.943
HDS-1

UniProt

c.35G>A p.Cys12Tyr missense variant moderate contig1891 889357

IGV: Start, Jump

C/T
NGS:
0.094
C90:
0.646
PIE1-2

UniProt

c.6773T>C p.Leu2258Ser missense variant moderate contig1460 1184314

IGV: Start, Jump

A/G
NGS:
0.046
C90:
0.675
PIE1-2

UniProt

c.6653A>G p.Asn2218Ser missense variant moderate contig1460 1184434

IGV: Start, Jump

T/C
NGS:
0.059
C90:
0.928
PIE1-2

UniProt

c.6636T>G p.Asp2212Glu missense variant moderate contig1460 1184451

IGV: Start, Jump

A/C
NGS:
0.035
C90:
0.885
PIE1-2

UniProt

c.6623C>T p.Ala2208Val missense variant moderate contig1460 1184464

IGV: Start, Jump

G/A
NGS:
0.044
C90:
0.689
PIE1-2

UniProt

c.6307A>C p.Lys2103Gln missense variant moderate contig1460 1185177

IGV: Start, Jump

T/G
NGS:
0.004
C90:
0.679
PIE1-2

UniProt

c.6055C>T p.Leu2019Phe missense variant moderate contig1460 1185429

IGV: Start, Jump

G/A
NGS:
0.015
C90:
0.469
PIE1-2

UniProt

c.5132T>C p.Ile1711Thr missense variant moderate contig1460 1186607

IGV: Start, Jump

A/G
NGS:
0.000
C90:
0.852
PIE1-2

UniProt

c.3512A>G p.Lys1171Arg missense variant moderate contig1460 1188528

IGV: Start, Jump

T/C
NGS:
0.018
C90:
0.670
PIE1-2

UniProt

c.2083_2085delGTC p.Val695del conservative inframe deletion moderate contig1460 1189954

IGV: Start, Jump

GGAC/G
NGS:
0.046
C90:
0.880
PIE1-2

UniProt

c.2072A>G p.His691Arg missense variant moderate contig1460 1189968

IGV: Start, Jump

T/C
NGS:
0.046
C90:
0.789
PIE1-2

UniProt

c.1872T>A p.Asp624Glu missense variant moderate contig1460 1190252

IGV: Start, Jump

A/T
NGS:
0.086
C90:
0.990
PIE1-2

UniProt

c.1630G>C p.Ala544Pro missense variant moderate contig1460 1191600

IGV: Start, Jump

C/G
NGS:
0.070
C90:
0.933
PIE1-2

UniProt

c.1156T>G p.Trp386Gly missense variant moderate contig1460 1192242

IGV: Start, Jump

A/C
NGS:
0.009
C90:
0.976
PIE1-2

UniProt

c.1117C>G p.Gln373Glu missense variant moderate contig1460 1192281

IGV: Start, Jump

G/C
NGS:
0.002
C90:
0.818
PIE1-2

UniProt

c.1093G>A p.Gly365Ser missense variant moderate contig1460 1192305

IGV: Start, Jump

C/T
NGS:
0.002
C90:
0.986
PIE1-2

UniProt

c.982G>A p.Glu328Lys missense variant moderate contig1460 1192416

IGV: Start, Jump

C/T
NGS:
0.050
C90:
0.976
PIE1-2

UniProt

c.710C>T p.Pro237Leu missense variant moderate contig1460 1193804

IGV: Start, Jump

G/A
NGS:
0.072
C90:
0.866
PIE1-2

UniProt

c.706T>C p.Tyr236His missense variant moderate contig1460 1193808

IGV: Start, Jump

A/G
NGS:
0.059
C90:
0.737
PIE1-2

UniProt

c.637T>A p.Ser213Thr missense variant moderate contig1460 1194421

IGV: Start, Jump

A/T
NGS:
0.079
C90:
0.885
PIE1-2

UniProt

c.349C>T p.Pro117Ser missense variant & splice region variant moderate contig1460 1195017

IGV: Start, Jump

G/A
NGS:
0.000
C90:
0.962
EMF2

UniProt

c.1772A>G p.Gln591Arg missense variant moderate contig954 3059929

IGV: Start, Jump

A/G
NGS:
0.092
C90:
0.876
FLD

UniProt

c.2981T>C p.Met994Thr missense variant moderate contig1450 2044012

IGV: Start, Jump

A/G
NGS:
0.064
C90:
0.478
FLD

UniProt

c.2964C>A p.Asp988Glu missense variant moderate contig1450 2044029

IGV: Start, Jump

G/T
NGS:
0.057
C90:
0.464
FLD

UniProt

c.2929T>C p.Phe977Leu missense variant moderate contig1450 2044103

IGV: Start, Jump

A/G
NGS:
0.026
C90:
0.349
FLD

UniProt

c.125G>A p.Ser42Asn missense variant moderate contig1450 2047909

IGV: Start, Jump

C/T
NGS:
0.037
C90:
0.388
PIE1-1

UniProt

c.100G>A p.Glu34Lys missense variant moderate contig1225 2277786

IGV: Start, Jump

G/A
NGS:
0.022
C90:
0.478
PIE1-1

UniProt

c.742T>A p.Ser248Thr missense variant moderate contig1225 2279320

IGV: Start, Jump

T/A
NGS:
0.002
C90:
0.890
PIE1-1

UniProt

c.773A>G p.Asn258Ser missense variant & splice region variant moderate contig1225 2279897

IGV: Start, Jump

A/G
NGS:
0.033
C90:
0.895
PIE1-1

UniProt

c.811T>C p.Tyr271His missense variant moderate contig1225 2279935

IGV: Start, Jump

T/C
NGS:
0.026
C90:
0.742
PIE1-1

UniProt

c.815C>T p.Pro272Leu missense variant moderate contig1225 2279939

IGV: Start, Jump

C/T
NGS:
0.029
C90:
0.885
PIE1-1

UniProt

c.1222C>G p.Gln408Glu missense variant moderate contig1225 2281482

IGV: Start, Jump

C/G
NGS:
0.096
C90:
0.852
PIE1-1

UniProt

c.1394A>G p.Asp465Gly missense variant moderate contig1225 2281654

IGV: Start, Jump

A/G
NGS:
0.007
C90:
0.818
PIE1-1

UniProt

c.1454T>C p.Val485Ala missense variant moderate contig1225 2281714

IGV: Start, Jump

T/C
NGS:
0.000
C90:
0.900
PIE1-1

UniProt

c.1548_1549insATG p.Gln516_Glu517insMet conservative inframe insertion moderate contig1225 2281807

IGV: Start, Jump

A/AGAT
NGS:
0.002
C90:
0.904
PIE1-1

UniProt

c.2174A>G p.His725Arg missense variant moderate contig1225 2283789

IGV: Start, Jump

A/G
NGS:
0.000
C90:
0.770
PIE1-1

UniProt

c.2185_2187delGTC p.Val729del conservative inframe deletion moderate contig1225 2283796

IGV: Start, Jump

AGTC/A
NGS:
0.000
C90:
0.876
PIE1-1

UniProt

c.3614A>G p.Lys1205Arg missense variant moderate contig1225 2285229

IGV: Start, Jump

A/G
NGS:
0.029
C90:
0.660
PIE1-1

UniProt

c.3869A>C p.Asn1290Thr missense variant moderate contig1225 2285484

IGV: Start, Jump

A/C
NGS:
0.002
C90:
0.909
PIE1-1

UniProt

c.5234T>C p.Ile1745Thr missense variant moderate contig1225 2287152

IGV: Start, Jump

T/C
NGS:
0.000
C90:
0.842
PIE1-1

UniProt

c.6041T>C p.Met2014Thr missense variant moderate contig1225 2288214

IGV: Start, Jump

T/C
NGS:
0.000
C90:
0.876
PIE1-1

UniProt

c.6409A>C p.Lys2137Gln missense variant moderate contig1225 2288582

IGV: Start, Jump

A/C
NGS:
0.002
C90:
0.660
PIE1-1

UniProt

c.6725C>T p.Ala2242Val missense variant moderate contig1225 2289290

IGV: Start, Jump

C/T
NGS:
0.046
C90:
0.737
PIE1-1

UniProt

c.6875T>C p.Leu2292Ser missense variant moderate contig1225 2289440

IGV: Start, Jump

T/C
NGS:
0.011
C90:
0.679

Nearest genetic relatives (All Samples)

0 0.033 0.067 0.100 0.133
closely related moderately related distantly related
  1. 0.003 Ice Cream Cake H (RSP12579)
  2. 0.106 JL Cross 78 (RSP11579)
  3. 0.108 Sunset Sherbert TC (RSP12582)
  4. 0.109 Sunset Sherbert H (RSP12578)
  5. 0.110 JL Cross 47 (RSP11548)
  6. 0.111 JL Cross 32 (RSP11533)
  7. 0.112 JL Cross 79 (RSP11580)
  8. 0.113 Legend OG H (RSP12581)
  9. 0.113 JL Cross 65 (RSP11566)
  10. 0.114 Yellow (RSP11607)
  11. 0.114 Legend OG TC (RSP12584)
  12. 0.116 Red Eye OG (RSP11190)
  13. 0.118 JL Cross 18 (RSP11519)
  14. 0.118 Girl Scout Cookies (RSP11653)
  15. 0.118 JL Cross 28 (RSP11529)
  16. 0.119 Wedding Cake x MAC (RSP11464)
  17. 0.120 Thank You Jerry (RSP11459)
  18. 0.122 JL Cross 77 (RSP11578)
  19. 0.123 Wedding Pie (RSP11744)
  20. 0.124 TI-4 (RSP11588)

Most genetically distant strains (All Samples)

0 0.067 0.133 0.200 0.267
closely related moderately related distantly related
  1. 0.246 Feral (RSP11205)
  2. 0.245 CS (RSP11208)
  3. 0.242 80E (RSP11212)
  4. 0.240 Tiborszallasie (RSP11210)
  5. 0.236 Fedora 17 (RSP11203)
  6. 0.235 Carmagnola USO 31 (RSP11204)
  7. 0.235 80E (RSP11213)
  8. 0.234 Carmaleonte (RSP11207)
  9. 0.232 Feral (RSP11206)
  10. 0.232 80E (RSP11211)
  11. 0.224 Eletta Campana (RSP11209)
  12. 0.209 Arcata Trainwreck (RSP11176)
  13. 0.202 Unknown- Cherry Wine - 004 (RSP11271)
  14. 0.201 Sativa Strain Unknown (RSP11644)
  15. 0.200 Unknown- Cherry Wine - 003 (RSP11270)
  16. 0.199 Chematonic Cannatonic x Chemdawg (RSP11394)
  17. 0.199 Unknown- Cherry Wine - 001 (RSP11268)
  18. 0.198 Swiss Dream (RSP11408)
  19. 0.198 Unknown- Cherry Wine - 002 (RSP11269)
  20. 0.197 Cbot-2019-005 (RSP11133)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR8349107
Overlapping SNPs:
79
Concordance:
59

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495160
Overlapping SNPs:
6
Concordance:
6

Blockchain Registration Information

Transaction ID
c73f3bd071b11b3d6f529f0f9b05b641162ff14993954cf0d6bd53d4381578f2
Stamping Certificate
Download PDF (39.5 KB)
SHASUM Hash
c133a4c93596d8f3e4c5ff87b73d12561bbcffedd5a55470a400104ee63fa60b
QR code for RSP12583

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